RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 C14orf144Q96I85 54 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 RYR3Q15413 4870 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 KRTAP26-1Q6PEX3 210 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 Q6ZRN7 208 aaPredicted RBP11.42□□□□□ -0.58
KRT4-201ENST00000548097 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
KRT4-201ENST00000548097 LINC00242Q5T6M2 205 aa11.41□□□□□ -0.58
KRT4-201ENST00000548097 PMCHL2Q9BQD1 86 aa11.41□□□□□ -0.58
KRT4-201ENST00000548097 FRAS1Q86XX4 4008 aa11.41□□□□□ -0.58
KRT4-201ENST00000548097 CDPF1Q6NVV7 123 aa11.4□□□□□ -0.58
KRT4-201ENST00000548097 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 KRTDAPP60985 99 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 LECT2O14960 151 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 PSCAO43653 123 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 C3orf79P0CE67 100 aa11.39□□□□□ -0.59
KRT4-201ENST00000548097 RTL8CO15255 209 aa11.38□□□□□ -0.59
KRT4-201ENST00000548097 FOXI1Q12951 378 aa11.38□□□□□ -0.59
KRT4-201ENST00000548097 C5orf38Q86SI9 138 aa11.38□□□□□ -0.59
KRT4-201ENST00000548097 MRPL35Q9NZE8 188 aaKnown RBP11.38□□□□□ -0.59
KRT4-201ENST00000548097 CHTOPQ9Y3Y2 248 aaKnown RBP11.38□□□□□ -0.59
KRT4-201ENST00000548097 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
KRT4-201ENST00000548097 SYS1-DBNDD2H3BUS1 97 aa11.37□□□□□ -0.59
KRT4-201ENST00000548097 RMI2Q96E14 147 aa11.37□□□□□ -0.59
KRT4-201ENST00000548097 ODF1Q14990 250 aa11.37□□□□□ -0.59
KRT4-201ENST00000548097 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
KRT4-201ENST00000548097 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
KRT4-201ENST00000548097 WFDC2Q14508 124 aa11.36□□□□□ -0.59
KRT4-201ENST00000548097 CD164L2Q6UWJ8 174 aa11.36□□□□□ -0.59
KRT4-201ENST00000548097 CHAC1Q9BUX1 264 aa11.35□□□□□ -0.59
KRT4-201ENST00000548097 TM2D2Q9BX73 214 aa11.35□□□□□ -0.59
KRT4-201ENST00000548097 IGHV3OR16-9A0A0B4J2B5 98 aa11.35□□□□□ -0.59
KRT4-201ENST00000548097 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
KRT4-201ENST00000548097 GEMIN7Q9H840 131 aaKnown RBP11.35□□□□□ -0.59
KRT4-201ENST00000548097 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
KRT4-201ENST00000548097 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
KRT4-201ENST00000548097 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
KRT4-201ENST00000548097 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
KRT4-201ENST00000548097 F8VRH5 84 aa11.33□□□□□ -0.6
KRT4-201ENST00000548097 IGLC3P0DOY3 106 aa11.33□□□□□ -0.6
KRT4-201ENST00000548097 TNP2Q05952 138 aa11.33□□□□□ -0.6
KRT4-201ENST00000548097 DNAH17Q9UFH2 4485 aa11.33□□□□□ -0.6
KRT4-201ENST00000548097 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
KRT4-201ENST00000548097 COX7A2LO14548 114 aa11.32□□□□□ -0.6
KRT4-201ENST00000548097 HERVK_113P63121 156 aa11.32□□□□□ -0.6
KRT4-201ENST00000548097 ZNF22P17026 224 aaPredicted RBP11.31□□□□□ -0.6
KRT4-201ENST00000548097 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 MALP21145 153 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 TMEM170BQ5T4T1 132 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 FAT2Q9NYQ8 4349 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 IGHV3-64A0A075B6Q5 118 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 SEC11AP67812 179 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
KRT4-201ENST00000548097 A0A087WZ39 114 aa11.29□□□□□ -0.6
KRT4-201ENST00000548097 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
KRT4-201ENST00000548097 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
KRT4-201ENST00000548097 HIGD2BQ4VC39 106 aa11.29□□□□□ -0.6
KRT4-201ENST00000548097 ATOH7Q8N100 152 aa11.29□□□□□ -0.6
KRT4-201ENST00000548097 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
KRT4-201ENST00000548097 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
KRT4-201ENST00000548097 A0A1B0GV90 55 aa11.28□□□□□ -0.6
KRT4-201ENST00000548097 A0A087WTM6 91 aa11.28□□□□□ -0.6
KRT4-201ENST00000548097 DPM2O94777 84 aa11.28□□□□□ -0.6
KRT4-201ENST00000548097 IGKCP01834 107 aa11.28□□□□□ -0.6
KRT4-201ENST00000548097 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.25□□□□□ -0.61
KRT4-201ENST00000548097 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
KRT4-201ENST00000548097 SCGB1D1O95968 90 aa11.25□□□□□ -0.61
KRT4-201ENST00000548097 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
KRT4-201ENST00000548097 PLNP26678 52 aa11.25□□□□□ -0.61
KRT4-201ENST00000548097 TOMM7Q9P0U1 55 aa11.25□□□□□ -0.61
KRT4-201ENST00000548097 hDV102S1A0JD36 115 aa11.24□□□□□ -0.61
KRT4-201ENST00000548097 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 M0R143 59 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 C20orf202A1L168 122 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 H3BRM9 83 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 STPG4Q8N801 248 aa11.23□□□□□ -0.61
KRT4-201ENST00000548097 Q8N814 137 aa11.22□□□□□ -0.61
KRT4-201ENST00000548097 APOMO95445 188 aa11.21□□□□□ -0.61
KRT4-201ENST00000548097 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
KRT4-201ENST00000548097 MAJINQ3KP22 176 aa11.21□□□□□ -0.61
KRT4-201ENST00000548097 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.62
KRT4-201ENST00000548097 SLPIP03973 132 aa11.21□□□□□ -0.62
KRT4-201ENST00000548097 CFAP161Q6P656 301 aa11.21□□□□□ -0.62
KRT4-201ENST00000548097 PKD1P98161 4303 aa11.2□□□□□ -0.62
KRT4-201ENST00000548097 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
KRT4-201ENST00000548097 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
KRT4-201ENST00000548097 KIAA0087Q14695 138 aa11.19□□□□□ -0.62
KRT4-201ENST00000548097 C2orf82Q6UX34 121 aa11.19□□□□□ -0.62
KRT4-201ENST00000548097 KRTAP10-2P60368 255 aa11.19□□□□□ -0.62
KRT4-201ENST00000548097 LINC00336Q6ZUF6 198 aa11.19□□□□□ -0.62
KRT4-201ENST00000548097 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
KRT4-201ENST00000548097 NTN5Q8WTR8 489 aaPredicted RBP11.19□□□□□ -0.62
KRT4-201ENST00000548097 HECTD4Q9Y4D8 3996 aa11.18□□□□□ -0.62
KRT4-201ENST00000548097 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
KRT4-201ENST00000548097 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms