RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
PRPF40B-206ENST00000547764 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
PRPF40B-206ENST00000547764 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
PRPF40B-206ENST00000547764 IGHV3OR16-9A0A0B4J2B5 98 aa11.99□□□□□ -0.49
PRPF40B-206ENST00000547764 G0S2P27469 103 aa11.99□□□□□ -0.49
PRPF40B-206ENST00000547764 TEX43Q6ZNM6 134 aa11.99□□□□□ -0.49
PRPF40B-206ENST00000547764 SLC7A5P1Q8MH63 180 aa11.99□□□□□ -0.49
PRPF40B-206ENST00000547764 LINC01546A6NGU7 62 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 NPSP0C0P6 89 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 ZC2HC1BQ5TFG8 222 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 Q6ZN92 141 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 LINC00528Q8N1L1 170 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 TOMM6Q96B49 74 aa11.98□□□□□ -0.49
PRPF40B-206ENST00000547764 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 APOMO95445 188 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 COX6A2Q02221 97 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 CIRBPQ14011 172 aaKnown RBP11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 LINC00242Q5T6M2 205 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 LINC00173Q6ZV60 143 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 AMELXQ99217 191 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 VCX2Q9H322 139 aa11.97□□□□□ -0.49
PRPF40B-206ENST00000547764 CHTF8P0CG12 524 aa11.96□□□□□ -0.49
PRPF40B-206ENST00000547764 UBE2D1P51668 147 aa11.96□□□□□ -0.49
PRPF40B-206ENST00000547764 CARD19Q96LW7 228 aa11.96□□□□□ -0.49
PRPF40B-206ENST00000547764 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
PRPF40B-206ENST00000547764 SYCNQ0VAF6 134 aa11.95□□□□□ -0.5
PRPF40B-206ENST00000547764 FA2HQ7L5A8 372 aa11.95□□□□□ -0.5
PRPF40B-206ENST00000547764 TIMM17AQ99595 171 aa11.95□□□□□ -0.5
PRPF40B-206ENST00000547764 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 ERASQ7Z444 233 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 OR10D4PQ8NGN7 298 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 SPACA4Q8TDM5 124 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 DPH3Q96FX2 82 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 SCGB3A1Q96QR1 104 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 SMCO4Q9NRQ5 59 aa11.93□□□□□ -0.5
PRPF40B-206ENST00000547764 A0A087WZ39 114 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 Q6ZRU5 148 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 CBLN2Q8IUK8 224 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 C18orf32Q8TCD1 76 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 CAMK2N2Q96S95 79 aa11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 SRRM2Q9UQ35 2752 aaKnown RBP11.92□□□□□ -0.5
PRPF40B-206ENST00000547764 PLA2G1BP04054 148 aaKnown RBP11.91□□□□□ -0.5
PRPF40B-206ENST00000547764 A0A087WYN8 130 aa11.9□□□□□ -0.5
PRPF40B-206ENST00000547764 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
PRPF40B-206ENST00000547764 LINC01549A6NIU2 74 aa11.9□□□□□ -0.5
PRPF40B-206ENST00000547764 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.5
PRPF40B-206ENST00000547764 A0A096LNI7 61 aa11.89□□□□□ -0.51
PRPF40B-206ENST00000547764 FAM19A3Q7Z5A8 133 aa11.89□□□□□ -0.51
PRPF40B-206ENST00000547764 LINC00614P0C842 121 aa11.88□□□□□ -0.51
PRPF40B-206ENST00000547764 MAJINQ3KP22 176 aa11.88□□□□□ -0.51
PRPF40B-206ENST00000547764 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
PRPF40B-206ENST00000547764 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
PRPF40B-206ENST00000547764 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
PRPF40B-206ENST00000547764 A0A096LNJ9 63 aa11.86□□□□□ -0.51
PRPF40B-206ENST00000547764 SEC11AP67812 179 aa11.86□□□□□ -0.51
PRPF40B-206ENST00000547764 A0A0J9YXV3 536 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 LOC107984640A0A0U1RRK4 108 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 F8WDY8 70 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 KRTAP10-4P60372 401 aaPredicted RBP11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 HERVK_113P63121 156 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 KIAA0087Q14695 138 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 LINC00474Q9P2X8 69 aa11.85□□□□□ -0.51
PRPF40B-206ENST00000547764 NDUFA1O15239 70 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 RAB5BP61020 215 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 RNF151Q2KHN1 245 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 C10orf25Q5T742 122 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 STPG4Q8N801 248 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 CST9LQ9H4G1 147 aa11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
PRPF40B-206ENST00000547764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 PTTG1IPP53801 180 aa11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 GAGE2BQ13066 116 aa11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 UNQ6190/PRO20217Q6UXQ8 127 aa11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 FLG2Q5D862 2391 aaPredicted RBP11.83□□□□□ -0.52
PRPF40B-206ENST00000547764 HBDP02042 147 aa11.82□□□□□ -0.52
PRPF40B-206ENST00000547764 RPL37AP61513 92 aaKnown RBP11.82□□□□□ -0.52
PRPF40B-206ENST00000547764 PMVKQ15126 192 aa11.82□□□□□ -0.52
PRPF40B-206ENST00000547764 TINCRA0A1B0GVN0 87 aa11.8□□□□□ -0.52
PRPF40B-206ENST00000547764 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
PRPF40B-206ENST00000547764 C6orf48Q9UBA6 75 aa11.8□□□□□ -0.52
PRPF40B-206ENST00000547764 TRGC2P03986 189 aa11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 PDZD11Q5EBL8 140 aa11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 LINC00469Q8N7U9 141 aa11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 PACRGQ96M98 296 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 MYCBP2O75592 4640 aa11.79□□□□□ -0.52
PRPF40B-206ENST00000547764 PRSS2P07478 247 aa11.78□□□□□ -0.52
PRPF40B-206ENST00000547764 IGLV5-45A0A087WSX0 123 aa11.77□□□□□ -0.53
PRPF40B-206ENST00000547764 Q8IZM0 81 aa11.77□□□□□ -0.53
PRPF40B-206ENST00000547764 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-206ENST00000547764 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms