RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 SPATA3Q8NHX4 192 aa12.35□□□□□ -0.43
LETMD1-210ENST00000547555 HERV-K104P63124 156 aa12.35□□□□□ -0.43
LETMD1-210ENST00000547555 CHCHD7Q9BUK0 85 aa12.35□□□□□ -0.43
LETMD1-210ENST00000547555 CSDC2Q9Y534 153 aaKnown RBP12.35□□□□□ -0.43
LETMD1-210ENST00000547555 IGHV3-64A0A075B6Q5 118 aa12.34□□□□□ -0.43
LETMD1-210ENST00000547555 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
LETMD1-210ENST00000547555 UQCRQO14949 82 aa12.33□□□□□ -0.44
LETMD1-210ENST00000547555 TRAV8-3A0A0A6YYJ7 113 aa12.32□□□□□ -0.44
LETMD1-210ENST00000547555 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
LETMD1-210ENST00000547555 IGKV3-7A0A075B6H7 116 aa12.32□□□□□ -0.44
LETMD1-210ENST00000547555 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
LETMD1-210ENST00000547555 LINC00308Q8TCZ7 52 aa12.32□□□□□ -0.44
LETMD1-210ENST00000547555 DEFB136Q30KP8 78 aa12.31□□□□□ -0.44
LETMD1-210ENST00000547555 SPINK13Q1W4C9 94 aa12.3□□□□□ -0.44
LETMD1-210ENST00000547555 C3orf22Q8N5N4 141 aa12.3□□□□□ -0.44
LETMD1-210ENST00000547555 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
LETMD1-210ENST00000547555 DUX3Q96PT4 197 aa12.3□□□□□ -0.44
LETMD1-210ENST00000547555 LINC01587Q99440 93 aa12.3□□□□□ -0.44
LETMD1-210ENST00000547555 CCL24O00175 119 aa12.29□□□□□ -0.44
LETMD1-210ENST00000547555 ANK2Q01484 3957 aa12.29□□□□□ -0.44
LETMD1-210ENST00000547555 C5orf38Q86SI9 138 aa12.29□□□□□ -0.44
LETMD1-210ENST00000547555 LINC00526Q96FQ7 95 aa12.29□□□□□ -0.44
LETMD1-210ENST00000547555 SMIM20Q8N5G0 67 aa12.29□□□□□ -0.44
LETMD1-210ENST00000547555 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
LETMD1-210ENST00000547555 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
LETMD1-210ENST00000547555 TRAV13-2A0A0B4J235 113 aa12.27□□□□□ -0.45
LETMD1-210ENST00000547555 A0A1B0GX51 115 aa12.27□□□□□ -0.45
LETMD1-210ENST00000547555 RS1O15537 224 aa12.26□□□□□ -0.45
LETMD1-210ENST00000547555 HOXD3P31249 432 aaPredicted RBP12.26□□□□□ -0.45
LETMD1-210ENST00000547555 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
LETMD1-210ENST00000547555 CDKN2A-AS1Q9UH64 79 aa12.26□□□□□ -0.45
LETMD1-210ENST00000547555 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
LETMD1-210ENST00000547555 SLURP1P55000 103 aa12.25□□□□□ -0.45
LETMD1-210ENST00000547555 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
LETMD1-210ENST00000547555 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
LETMD1-210ENST00000547555 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
LETMD1-210ENST00000547555 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
LETMD1-210ENST00000547555 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
LETMD1-210ENST00000547555 VWFP04275 2813 aa12.24□□□□□ -0.45
LETMD1-210ENST00000547555 ATOX1O00244 68 aa12.23□□□□□ -0.45
LETMD1-210ENST00000547555 CHCHD5Q9BSY4 110 aa12.23□□□□□ -0.45
LETMD1-210ENST00000547555 NACAE9PAV3 2078 aa12.23□□□□□ -0.45
LETMD1-210ENST00000547555 BAALC-AS2P0C853 105 aa12.22□□□□□ -0.45
LETMD1-210ENST00000547555 HIST1H4AP62805 103 aaKnown RBP12.22□□□□□ -0.45
LETMD1-210ENST00000547555 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
LETMD1-210ENST00000547555 ZNF625Q96I27 306 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-210ENST00000547555 Q9H8V8 135 aa12.22□□□□□ -0.45
LETMD1-210ENST00000547555 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
LETMD1-210ENST00000547555 DAZ4Q86SG3 579 aaKnown RBP12.22□□□□□ -0.45
LETMD1-210ENST00000547555 DAZ3Q9NR90 486 aaKnown RBP12.22□□□□□ -0.45
LETMD1-210ENST00000547555 H0YGX0 51 aa12.21□□□□□ -0.45
LETMD1-210ENST00000547555 CRYGAP11844 174 aa12.21□□□□□ -0.45
LETMD1-210ENST00000547555 COX7CP15954 63 aa12.21□□□□□ -0.45
LETMD1-210ENST00000547555 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
LETMD1-210ENST00000547555 LINC00242Q5T6M2 205 aa12.2□□□□□ -0.46
LETMD1-210ENST00000547555 C9orf153Q5TBE3 101 aa12.2□□□□□ -0.46
LETMD1-210ENST00000547555 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
LETMD1-210ENST00000547555 TRRAPQ9Y4A5 3859 aa12.2□□□□□ -0.46
LETMD1-210ENST00000547555 IGHV3OR16-12A0A075B7B8 117 aa12.19□□□□□ -0.46
LETMD1-210ENST00000547555 SMIM1B2RUZ4 78 aa12.19□□□□□ -0.46
LETMD1-210ENST00000547555 IGKV3-20P01619 116 aa12.19□□□□□ -0.46
LETMD1-210ENST00000547555 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
LETMD1-210ENST00000547555 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
LETMD1-210ENST00000547555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
LETMD1-210ENST00000547555 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
LETMD1-210ENST00000547555 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
LETMD1-210ENST00000547555 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
LETMD1-210ENST00000547555 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
LETMD1-210ENST00000547555 INSP01308 110 aa12.16□□□□□ -0.46
LETMD1-210ENST00000547555 EDN2P20800 178 aa12.16□□□□□ -0.46
LETMD1-210ENST00000547555 MALP21145 153 aa12.16□□□□□ -0.46
LETMD1-210ENST00000547555 OBSCN-AS1Q96MR7 158 aa12.16□□□□□ -0.46
LETMD1-210ENST00000547555 J3KT08 172 aa12.15□□□□□ -0.46
LETMD1-210ENST00000547555 RPL36AP83881 106 aaKnown RBP12.15□□□□□ -0.46
LETMD1-210ENST00000547555 Q6JHZ5 121 aa12.15□□□□□ -0.46
LETMD1-210ENST00000547555 RPL36ALQ969Q0 106 aaKnown RBP12.15□□□□□ -0.46
LETMD1-210ENST00000547555 DNHD1Q96M86 4753 aa12.15□□□□□ -0.46
LETMD1-210ENST00000547555 A8MZ25 164 aa12.14□□□□□ -0.47
LETMD1-210ENST00000547555 F5H768 121 aa12.14□□□□□ -0.47
LETMD1-210ENST00000547555 CRPP02741 224 aa12.14□□□□□ -0.47
LETMD1-210ENST00000547555 NPC2P61916 151 aa12.14□□□□□ -0.47
LETMD1-210ENST00000547555 SMCR5Q8TEV8 140 aa12.14□□□□□ -0.47
LETMD1-210ENST00000547555 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
LETMD1-210ENST00000547555 Q6ZSN1 163 aa12.13□□□□□ -0.47
LETMD1-210ENST00000547555 WIPF1O43516 503 aa12.13□□□□□ -0.47
LETMD1-210ENST00000547555 RNASE13Q5GAN3 156 aaKnown RBP12.13□□□□□ -0.47
LETMD1-210ENST00000547555 PKD1L1Q8TDX9 2849 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 IGHV3-73A0A0B4J1V6 119 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 DNAL4O96015 105 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 DEFB131AP59861 70 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 COX6A2Q02221 97 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 IL17DQ8TAD2 202 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 CDC42SE2Q9NRR3 84 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 C22orf24Q9Y442 160 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 NOTCH3Q9UM47 2321 aa12.12□□□□□ -0.47
LETMD1-210ENST00000547555 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
LETMD1-210ENST00000547555 TRAV25A0A0B4J276 109 aa12.1□□□□□ -0.47
LETMD1-210ENST00000547555 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
LETMD1-210ENST00000547555 C2orf48Q96LS8 159 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms