RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 APOMO95445 188 aa9.38□□□□□ -0.91
DDX54-203ENST00000546869 SLPIP03973 132 aa9.38□□□□□ -0.91
DDX54-203ENST00000546869 MALP21145 153 aa9.38□□□□□ -0.91
DDX54-203ENST00000546869 SEC11AP67812 179 aa9.38□□□□□ -0.91
DDX54-203ENST00000546869 HBDP02042 147 aa9.37□□□□□ -0.91
DDX54-203ENST00000546869 PDZD11Q5EBL8 140 aa9.37□□□□□ -0.91
DDX54-203ENST00000546869 Q6ZSA8 131 aa9.37□□□□□ -0.91
DDX54-203ENST00000546869 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
DDX54-203ENST00000546869 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 A0A087WZ39 114 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.36□□□□□ -0.91
DDX54-203ENST00000546869 SCO1O75880 301 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 S100A1P23297 94 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
DDX54-203ENST00000546869 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
DDX54-203ENST00000546869 XGP55808 180 aa9.35□□□□□ -0.91
DDX54-203ENST00000546869 HIGD2BQ4VC39 106 aa9.35□□□□□ -0.91
DDX54-203ENST00000546869 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
DDX54-203ENST00000546869 CST9LQ9H4G1 147 aa9.35□□□□□ -0.91
DDX54-203ENST00000546869 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 F8WDY8 70 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 HERVK_113P63121 156 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 COX6A2Q02221 97 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 PMVKQ15126 192 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 C2orf48Q96LS8 159 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 FAM30AQ9NZY2 134 aa9.34□□□□□ -0.91
DDX54-203ENST00000546869 ATP5LO75964 103 aa9.33□□□□□ -0.92
DDX54-203ENST00000546869 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
DDX54-203ENST00000546869 TINCRA0A1B0GVN0 87 aa9.32□□□□□ -0.92
DDX54-203ENST00000546869 PMCHL1Q16048 86 aa9.32□□□□□ -0.92
DDX54-203ENST00000546869 IGLV4-69A0A075B6H9 119 aa9.31□□□□□ -0.92
DDX54-203ENST00000546869 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
DDX54-203ENST00000546869 PKIGQ9Y2B9 76 aa9.31□□□□□ -0.92
DDX54-203ENST00000546869 IGLV5-45A0A087WSX0 123 aa9.3□□□□□ -0.92
DDX54-203ENST00000546869 A0A0J9YXV3 536 aa9.3□□□□□ -0.92
DDX54-203ENST00000546869 HSBP1O75506 76 aa9.3□□□□□ -0.92
DDX54-203ENST00000546869 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
DDX54-203ENST00000546869 GEMIN7Q9H840 131 aaKnown RBP9.3□□□□□ -0.92
DDX54-203ENST00000546869 RYR1P21817 5038 aa9.3□□□□□ -0.92
DDX54-203ENST00000546869 LINC00310P59036 64 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 SPAG11BQ08648 103 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 CIRBPQ14011 172 aaKnown RBP9.29□□□□□ -0.92
DDX54-203ENST00000546869 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 ORAOV1Q8WV07 137 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 CARD19Q96LW7 228 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 CDKN2A-AS1Q9UH64 79 aa9.29□□□□□ -0.92
DDX54-203ENST00000546869 ATP6V1G1O75348 118 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 SERF1AO75920 110 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 IGLC3P0DOY3 106 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 HERC2O95714 4834 aa9.28□□□□□ -0.92
DDX54-203ENST00000546869 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BKO60814 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BJP06899 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BOP23527 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BBP33778 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BDP58876 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BCP62807 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST2H2BEQ16778 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.27□□□□□ -0.93
DDX54-203ENST00000546869 Q8N1X5 172 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BHQ93079 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BNQ99877 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 HIST1H2BMQ99879 126 aa9.27□□□□□ -0.93
DDX54-203ENST00000546869 MRPL35Q9NZE8 188 aaKnown RBP9.27□□□□□ -0.93
DDX54-203ENST00000546869 TRAV12-1A0A0B4J245 112 aa9.26□□□□□ -0.93
DDX54-203ENST00000546869 Q6ZRU5 148 aa9.26□□□□□ -0.93
DDX54-203ENST00000546869 FAM19A2Q8N3H0 131 aa9.26□□□□□ -0.93
DDX54-203ENST00000546869 IFI27L1Q96BM0 104 aa9.26□□□□□ -0.93
DDX54-203ENST00000546869 DNAH8Q96JB1 4490 aa9.26□□□□□ -0.93
DDX54-203ENST00000546869 NDUFA1O15239 70 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 NUPR1O60356 82 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 SCXQ7RTU7 201 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 Q8IZM0 81 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 LINC00469Q8N7U9 141 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
DDX54-203ENST00000546869 NDUFA6P56556 154 aa9.24□□□□□ -0.93
DDX54-203ENST00000546869 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
DDX54-203ENST00000546869 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
DDX54-203ENST00000546869 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
DDX54-203ENST00000546869 TRBV30A0A0K0K1B3 111 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 SMIM1B2RUZ4 78 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 H3BRM9 83 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 SPACA4Q8TDM5 124 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 HSPG2P98160 4391 aa9.23□□□□□ -0.93
DDX54-203ENST00000546869 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 PANO1I0J062 215 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 PRSS2P07478 247 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 C6orf226Q5I0X4 101 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
DDX54-203ENST00000546869 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
DDX54-203ENST00000546869 HSPB8Q9UJY1 196 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms