RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 NFE4Q86UQ8 179 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 SLC25A29Q8N8R3 303 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 NEXN-AS1Q8NBZ9 246 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 SGK494Q96LW2 274 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
CCDC60-205ENST00000546345 SMIM2Q9BVW6 85 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
CCDC60-205ENST00000546345 TRAV8-1A0A0A6YYK1 113 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 LOC107984156A0A0G2JMH3 177 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 SDHAF1A6NFY7 115 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 ZNF815PA8K554 130 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 K7ERJ3 54 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 IGKV1-17P01599 117 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 PSMB2P49721 201 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 FAM106AQ4KMX7 169 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 C5orf47Q569G3 176 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 ARL17AQ8IVW1 177 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 EXOC3-AS1Q8N2X6 119 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 ANKRD29Q8N6D5 301 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 COPS9Q8WXC6 57 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 TMEM101Q96IK0 257 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 TIMM17AQ99595 171 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 TPPP3Q9BW30 176 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 PPDPFQ9H3Y8 114 aa4.68□□□□□ -1.66
CCDC60-205ENST00000546345 TRAV8-2A0A0B4J237 113 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 TRAV10A0A0B4J240 114 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 TRBV10-2A0A0K0K1G8 114 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 J3KRW8 73 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 M0R2P5 195 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 MYOD1P15172 320 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 CXCL5P42830 114 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 ERCC8Q13216 396 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 C15orf53Q8NAA6 179 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 USMG5Q96IX5 58 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 SCGB3A1Q96QR1 104 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 SS18L2Q9UHA2 77 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 CELA1Q9UNI1 258 aa4.67□□□□□ -1.66
CCDC60-205ENST00000546345 TRAV8-4A0A0B4J246 113 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 A0A0J9YY99 117 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 E7EUB6 86 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 UQCRQO14949 82 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 DUSP14O95147 198 aaKnown RBP4.66□□□□□ -1.66
CCDC60-205ENST00000546345 IGHV3-30P01768 117 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 CFC1BP0CG36 223 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 CFC1P0CG37 223 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 APELAP0DMC3 54 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 IGHV3-30-5P0DP03 117 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 HERV-K104P63124 156 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 PMVKQ15126 192 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 PTH2Q96A98 100 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 PLEKHB2Q96CS7 222 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 PRADC1Q9BSG0 188 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 DPH3P1Q9H4G8 78 aa4.66□□□□□ -1.66
CCDC60-205ENST00000546345 MRPL36Q9P0J6 103 aaKnown RBP4.66□□□□□ -1.66
CCDC60-205ENST00000546345 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 A0A0J9YXY3 114 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 H3BMM0 161 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 K7EIM0 57 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 TCL1BO95988 128 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 UNQ9165/PRO28630Q6UXU0 137 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 UBE2WQ96B02 151 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.67
CCDC60-205ENST00000546345 LRP2P98164 4655 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 TRAV2A0A0B4J234 112 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 TRAV25A0A0B4J276 109 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 FAM223BA6NKX1 122 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 J3KT08 172 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 LINC01620Q4KN68 170 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 MEIG1Q5JSS6 88 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 APRG1Q8IVJ8 170 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 FAM223AQ8IWN6 122 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 OR13C6PQ8NH95 151 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 BAALCQ8WXS3 180 aa4.64□□□□□ -1.67
CCDC60-205ENST00000546345 IGLV11-55A0A075B6I3 123 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 C9JAW5 83 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 LEPROTO15243 131 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 TIMM17BO60830 172 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 IGHV3-33P01772 117 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 GIG44P09565 113 aaPredicted RBP4.63□□□□□ -1.67
CCDC60-205ENST00000546345 LGALS3P17931 250 aaKnown RBP4.63□□□□□ -1.67
CCDC60-205ENST00000546345 RHOHQ15669 191 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 C15orf32Q32M92 178 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 SPANXN1Q5VSR9 72 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 C2orf66Q6UXQ4 117 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 LINC00643Q86TS7 51 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 GPHB5Q86YW7 130 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 SMIM20Q8N5G0 67 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 RASL10AQ92737 203 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 LINC00477Q96M19 166 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 KIR2DL4Q99706 377 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 C21orf62Q9NYP8 219 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 S4R3C0 116 aa4.63□□□□□ -1.67
CCDC60-205ENST00000546345 PKHD1L1Q86WI1 4243 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 TRAV21A0A0B4J279 112 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 IGHV7-4-1A0A0J9YVY3 117 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 TRBV6-5A0A0K0K1A5 114 aa4.62□□□□□ -1.67
CCDC60-205ENST00000546345 VCYO14598 125 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms