RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 UBE2D1P51668 147 aa10.92□□□□□ -0.66
LTBR-215ENST00000546296 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
LTBR-215ENST00000546296 LINC00242Q5T6M2 205 aa10.92□□□□□ -0.66
LTBR-215ENST00000546296 LINC00173Q6ZV60 143 aa10.92□□□□□ -0.66
LTBR-215ENST00000546296 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
LTBR-215ENST00000546296 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.91□□□□□ -0.66
LTBR-215ENST00000546296 HBDP02042 147 aa10.91□□□□□ -0.66
LTBR-215ENST00000546296 PMCHL1Q16048 86 aa10.91□□□□□ -0.66
LTBR-215ENST00000546296 C9orf163Q8N9P6 203 aa10.91□□□□□ -0.66
LTBR-215ENST00000546296 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
LTBR-215ENST00000546296 SLPIP03973 132 aa10.9□□□□□ -0.66
LTBR-215ENST00000546296 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
LTBR-215ENST00000546296 LINC00526Q96FQ7 95 aa10.9□□□□□ -0.66
LTBR-215ENST00000546296 COX6A2Q02221 97 aa10.89□□□□□ -0.67
LTBR-215ENST00000546296 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
LTBR-215ENST00000546296 IGHV3-64A0A075B6Q5 118 aa10.88□□□□□ -0.67
LTBR-215ENST00000546296 NDUFA6P56556 154 aa10.88□□□□□ -0.67
LTBR-215ENST00000546296 SEC11AP67812 179 aa10.88□□□□□ -0.67
LTBR-215ENST00000546296 GEMIN7Q9H840 131 aaKnown RBP10.88□□□□□ -0.67
LTBR-215ENST00000546296 A0A096LNJ9 63 aa10.87□□□□□ -0.67
LTBR-215ENST00000546296 XGP55808 180 aa10.87□□□□□ -0.67
LTBR-215ENST00000546296 PMVKQ15126 192 aa10.87□□□□□ -0.67
LTBR-215ENST00000546296 ORAOV1Q8WV07 137 aa10.87□□□□□ -0.67
LTBR-215ENST00000546296 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
LTBR-215ENST00000546296 RYR1P21817 5038 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 IGLV4-69A0A075B6H9 119 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 A0A087WZ39 114 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 ATP5LO75964 103 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 S100A1P23297 94 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 HERVK_113P63121 156 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 HAMPP81172 84 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 OR10D4PQ8NGN7 298 aa10.86□□□□□ -0.67
LTBR-215ENST00000546296 HSBP1O75506 76 aa10.85□□□□□ -0.67
LTBR-215ENST00000546296 SYCNQ0VAF6 134 aa10.85□□□□□ -0.67
LTBR-215ENST00000546296 SDIM1Q6ZPB5 146 aa10.85□□□□□ -0.67
LTBR-215ENST00000546296 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
LTBR-215ENST00000546296 CARD19Q96LW7 228 aa10.85□□□□□ -0.67
LTBR-215ENST00000546296 APOBP04114 4563 aaKnown RBP10.85□□□□□ -0.67
LTBR-215ENST00000546296 HERC2O95714 4834 aa10.84□□□□□ -0.67
LTBR-215ENST00000546296 Q6ZSA8 131 aa10.84□□□□□ -0.67
LTBR-215ENST00000546296 CAMK2N2Q96S95 79 aa10.84□□□□□ -0.67
LTBR-215ENST00000546296 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
LTBR-215ENST00000546296 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
LTBR-215ENST00000546296 DPH3Q96FX2 82 aa10.83□□□□□ -0.68
LTBR-215ENST00000546296 C2orf48Q96LS8 159 aa10.83□□□□□ -0.68
LTBR-215ENST00000546296 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
LTBR-215ENST00000546296 SERF1AO75920 110 aa10.82□□□□□ -0.68
LTBR-215ENST00000546296 FAM19A2Q8N3H0 131 aa10.82□□□□□ -0.68
LTBR-215ENST00000546296 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
LTBR-215ENST00000546296 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
LTBR-215ENST00000546296 CDKN2A-AS1Q9UH64 79 aa10.82□□□□□ -0.68
LTBR-215ENST00000546296 CHAC1Q9BUX1 264 aa10.81□□□□□ -0.68
LTBR-215ENST00000546296 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
LTBR-215ENST00000546296 PRSS2P07478 247 aa10.8□□□□□ -0.68
LTBR-215ENST00000546296 Q6ZRU5 148 aa10.8□□□□□ -0.68
LTBR-215ENST00000546296 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
LTBR-215ENST00000546296 F8WDY8 70 aa10.79□□□□□ -0.68
LTBR-215ENST00000546296 NDUFA1O15239 70 aa10.79□□□□□ -0.68
LTBR-215ENST00000546296 SMR3BP02814 79 aaPredicted RBP10.79□□□□□ -0.68
LTBR-215ENST00000546296 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
LTBR-215ENST00000546296 TOMM7Q9P0U1 55 aa10.79□□□□□ -0.68
LTBR-215ENST00000546296 HSPG2P98160 4391 aa10.79□□□□□ -0.68
LTBR-215ENST00000546296 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
LTBR-215ENST00000546296 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.78□□□□□ -0.68
LTBR-215ENST00000546296 CHTF8P0CG12 524 aa10.77□□□□□ -0.69
LTBR-215ENST00000546296 LINC00310P59036 64 aa10.77□□□□□ -0.69
LTBR-215ENST00000546296 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.69
LTBR-215ENST00000546296 Q8N1X5 172 aa10.77□□□□□ -0.69
LTBR-215ENST00000546296 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
LTBR-215ENST00000546296 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 H3BRM9 83 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 NUPR1O60356 82 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 CKS1BP61024 79 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
LTBR-215ENST00000546296 UNQ6190/PRO20217Q6UXQ8 127 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
LTBR-215ENST00000546296 CHTOPQ9Y3Y2 248 aaKnown RBP10.76□□□□□ -0.69
LTBR-215ENST00000546296 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
LTBR-215ENST00000546296 LOC107984640A0A0U1RRK4 108 aa10.75□□□□□ -0.69
LTBR-215ENST00000546296 PANO1I0J062 215 aa10.75□□□□□ -0.69
LTBR-215ENST00000546296 RNF151Q2KHN1 245 aa10.75□□□□□ -0.69
LTBR-215ENST00000546296 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
LTBR-215ENST00000546296 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 FABP4P15090 132 aa10.74□□□□□ -0.69
LTBR-215ENST00000546296 MAJINQ3KP22 176 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms