RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 PINLYPA6NC86 204 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 K7ERS5 55 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 COX7A1P24310 79 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 ROMO1P60602 79 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 FAM218AQ96MZ4 157 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 KLK15Q9H2R5 256 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 LENEPQ9Y5L5 61 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 COL12A1Q99715 3063 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 A0A087WW49 117 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 IGHV3-74A0A0B4J1X5 117 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 CCL3P10147 92 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 BRWD1-AS2P59051 145 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 C1orf134Q5TEV5 83 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 ZFAND2AQ8N6M9 145 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 C20orf203Q8NBC4 194 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
UBE4A-203ENST00000545354 COL4A2P08572 1712 aa3.53□□□□□ -1.85
UBE4A-203ENST00000545354 INTS1Q8N201 2190 aaKnown RBP3.52□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-43A0A0B4J1X8 118 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 TRBV10-1A0A0K0K1A3 114 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 K7EQD1 137 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 NCR3O14931 201 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 C9orf66Q5T8R8 295 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 FAM27BQ5VT28 67 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 HIGD2AQ9BW72 106 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 ZNF462Q96JM2 2506 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 LRCOL1A6NCL2 159 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-11P01762 117 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 DAZAP2Q15038 168 aaPredicted RBP3.52□□□□□ -1.85
UBE4A-203ENST00000545354 KLK9Q9UKQ9 250 aa3.52□□□□□ -1.85
UBE4A-203ENST00000545354 ADAMTS20P59510 1910 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV4-28A0A0C4DH34 117 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV4-61A0A0C4DH41 118 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV4-59P01825 116 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
UBE4A-203ENST00000545354 CAMK2N2Q96S95 79 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 DPM3Q9P2X0 92 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 PLA2G2DQ9UNK4 145 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 PIEZO2Q9H5I5 2752 aa3.51□□□□□ -1.85
UBE4A-203ENST00000545354 SPTA1P02549 2419 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 TSHBP01222 138 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 FSHBP01225 129 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV4-30-4P0DP06 118 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 Q6ZQT0 140 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 TEX15Q9BXT5 2789 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 CACNA1CQ13936 2221 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 LRRK1Q38SD2 2015 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 TEP1Q99973 2627 aaKnown RBP3.5□□□□□ -1.85
UBE4A-203ENST00000545354 PTPN13Q12923 2485 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-21A0A0B4J1V1 117 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 PATE3B3GLJ2 98 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 CHTF8P0CG12 524 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
UBE4A-203ENST00000545354 HCP5Q6MZN7 132 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 FDCSPQ8NFU4 85 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 MED13Q9UHV7 2174 aa3.5□□□□□ -1.85
UBE4A-203ENST00000545354 ASXL3Q9C0F0 2248 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-49A0A0A0MS15 119 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 NDPQ00604 133 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 SPAG11BQ08648 103 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 KRTAP19-4Q3LI73 84 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 SPAG11AQ6PDA7 123 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 C9orf47Q6ZRZ4 202 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 COX7B2Q8TF08 81 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 RPL36ALQ969Q0 106 aaKnown RBP3.49□□□□□ -1.85
UBE4A-203ENST00000545354 WFDC10AQ9H1F0 79 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 MSRB1Q9NZV6 116 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 HEATR5BQ9P2D3 2071 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 A8MU10 97 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 SRRM5B3KS81 715 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 B4DSR2 109 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 LECT2O14960 151 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 RTL8CO15255 209 aa3.49□□□□□ -1.85
UBE4A-203ENST00000545354 SDK1Q7Z5N4 2213 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 ADAMTS9Q9P2N4 1935 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 IGKV1D-37A0A075B6S9 117 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 POLR2KP53803 58 aaKnown RBP3.48□□□□□ -1.85
UBE4A-203ENST00000545354 DEFB134Q4QY38 66 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 RNASE13Q5GAN3 156 aaKnown RBP3.48□□□□□ -1.85
UBE4A-203ENST00000545354 MUC7Q8TAX7 377 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 FGF23Q9GZV9 251 aaPredicted RBP3.48□□□□□ -1.85
UBE4A-203ENST00000545354 ANKRD17O75179 2603 aaKnown RBP3.48□□□□□ -1.85
UBE4A-203ENST00000545354 FER1L5A0AVI2 2057 aa3.48□□□□□ -1.85
UBE4A-203ENST00000545354 IGLV5-45A0A087WSX0 123 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 ETDCA0A1B0GVM5 59 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3-23P01764 117 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 C11orf21Q9P2W6 132 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 DSCAML1Q8TD84 2053 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV3OR16-8A0A075B7F1 116 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 A0A087WSZ3 146 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 H3BRN7 92 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 PRB1P04280 392 aa3.47□□□□□ -1.85
UBE4A-203ENST00000545354 IGHV4-38-2P0DP08 117 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms