RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
CCDC78-216ENST00000544996 PANO1I0J062 215 aa10.05□□□□□ -0.8
CCDC78-216ENST00000544996 SYCNQ0VAF6 134 aa10.05□□□□□ -0.8
CCDC78-216ENST00000544996 CIRBPQ14011 172 aaKnown RBP10.05□□□□□ -0.8
CCDC78-216ENST00000544996 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
CCDC78-216ENST00000544996 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
CCDC78-216ENST00000544996 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
CCDC78-216ENST00000544996 MT-ND6P03923 174 aa10.04□□□□□ -0.8
CCDC78-216ENST00000544996 CHTF8P0CG12 524 aa10.04□□□□□ -0.8
CCDC78-216ENST00000544996 Q6ZN92 141 aa10.04□□□□□ -0.8
CCDC78-216ENST00000544996 PRSS3P2Q8NHM4 247 aa10.04□□□□□ -0.8
CCDC78-216ENST00000544996 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
CCDC78-216ENST00000544996 APOC3P02656 99 aa10.03□□□□□ -0.8
CCDC78-216ENST00000544996 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
CCDC78-216ENST00000544996 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
CCDC78-216ENST00000544996 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
CCDC78-216ENST00000544996 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 IGHV3OR16-9A0A0B4J2B5 98 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 SNAPINO95295 136 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 NPSP0C0P6 89 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 SVBPQ8N300 66 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 CAMK2N2Q96S95 79 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 VCX2Q9H322 139 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
CCDC78-216ENST00000544996 A0A087WYN8 130 aa10.01□□□□□ -0.81
CCDC78-216ENST00000544996 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
CCDC78-216ENST00000544996 MAJINQ3KP22 176 aa10.01□□□□□ -0.81
CCDC78-216ENST00000544996 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
CCDC78-216ENST00000544996 C2orf48Q96LS8 159 aa10.01□□□□□ -0.81
CCDC78-216ENST00000544996 SRRM2Q9UQ35 2752 aaKnown RBP10.01□□□□□ -0.81
CCDC78-216ENST00000544996 RPL37AP61513 92 aaKnown RBP10□□□□□ -0.81
CCDC78-216ENST00000544996 SPAG11BQ08648 103 aa10□□□□□ -0.81
CCDC78-216ENST00000544996 FABP9Q0Z7S8 132 aa10□□□□□ -0.81
CCDC78-216ENST00000544996 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
CCDC78-216ENST00000544996 ALKBH7Q9BT30 221 aaPredicted RBP10□□□□□ -0.81
CCDC78-216ENST00000544996 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
CCDC78-216ENST00000544996 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
CCDC78-216ENST00000544996 LINC00242Q5T6M2 205 aa9.99□□□□□ -0.81
CCDC78-216ENST00000544996 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
CCDC78-216ENST00000544996 A0A096LNI7 61 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 F8WDY8 70 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 UBE2D1P51668 147 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 Q6ZRU5 148 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 AMELXQ99217 191 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 PLAC8Q9NZF1 115 aa9.98□□□□□ -0.81
CCDC78-216ENST00000544996 A0A087WZ39 114 aa9.97□□□□□ -0.81
CCDC78-216ENST00000544996 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
CCDC78-216ENST00000544996 CTAG1AP78358 180 aa9.97□□□□□ -0.81
CCDC78-216ENST00000544996 STPG4Q8N801 248 aa9.97□□□□□ -0.81
CCDC78-216ENST00000544996 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
CCDC78-216ENST00000544996 VPS13BQ7Z7G8 4022 aa9.96□□□□□ -0.81
CCDC78-216ENST00000544996 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 KRTAP10-4P60372 401 aaPredicted RBP9.96□□□□□ -0.82
CCDC78-216ENST00000544996 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 C7orf33Q8WU49 177 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 SMCO4Q9NRQ5 59 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 TRAPPC1Q9Y5R8 145 aa9.96□□□□□ -0.82
CCDC78-216ENST00000544996 LINC01546A6NGU7 62 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 SEC11AP67812 179 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 RNF151Q2KHN1 245 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 LINC00173Q6ZV60 143 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 ERASQ7Z444 233 aa9.95□□□□□ -0.82
CCDC78-216ENST00000544996 NDUFA1O15239 70 aa9.94□□□□□ -0.82
CCDC78-216ENST00000544996 PTTG1IPP53801 180 aa9.94□□□□□ -0.82
CCDC78-216ENST00000544996 LINC01561Q8N1V8 128 aa9.93□□□□□ -0.82
CCDC78-216ENST00000544996 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
CCDC78-216ENST00000544996 HERVK_113P63121 156 aa9.92□□□□□ -0.82
CCDC78-216ENST00000544996 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
CCDC78-216ENST00000544996 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
CCDC78-216ENST00000544996 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
CCDC78-216ENST00000544996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
CCDC78-216ENST00000544996 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
CCDC78-216ENST00000544996 J3QL48 77 aa9.9□□□□□ -0.82
CCDC78-216ENST00000544996 PACRGQ96M98 296 aaPredicted RBP9.9□□□□□ -0.82
CCDC78-216ENST00000544996 FLG2Q5D862 2391 aaPredicted RBP9.89□□□□□ -0.83
CCDC78-216ENST00000544996 SCO1O75880 301 aa9.89□□□□□ -0.83
CCDC78-216ENST00000544996 PRSS2P07478 247 aa9.89□□□□□ -0.83
CCDC78-216ENST00000544996 KIAA0087Q14695 138 aa9.89□□□□□ -0.83
CCDC78-216ENST00000544996 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
CCDC78-216ENST00000544996 C18orf32Q8TCD1 76 aa9.89□□□□□ -0.83
CCDC78-216ENST00000544996 LINC00614P0C842 121 aa9.88□□□□□ -0.83
CCDC78-216ENST00000544996 RAB5BP61020 215 aa9.88□□□□□ -0.83
CCDC78-216ENST00000544996 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CCDC78-216ENST00000544996 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
CCDC78-216ENST00000544996 TRBV30A0A0K0K1B3 111 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
CCDC78-216ENST00000544996 CKS1BP61024 79 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 S100A12P80511 92 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 PMVKQ15126 192 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 TOMM7Q9P0U1 55 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
CCDC78-216ENST00000544996 TINCRA0A1B0GVN0 87 aa9.86□□□□□ -0.83
CCDC78-216ENST00000544996 TLX1NBP0CAT3 122 aa9.86□□□□□ -0.83
CCDC78-216ENST00000544996 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms