RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
CIT-216ENST00000544872 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
CIT-216ENST00000544872 LRCOL1A6NCL2 159 aa6.29□□□□□ -1.4
CIT-216ENST00000544872 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
CIT-216ENST00000544872 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
CIT-216ENST00000544872 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
CIT-216ENST00000544872 HSBP1O75506 76 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 ATP5LO75964 103 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 HBDP02042 147 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 SMR3BP02814 79 aaPredicted RBP6.28□□□□□ -1.4
CIT-216ENST00000544872 TRGC2P03986 189 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 NDUFA6P56556 154 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 Q6ZUT4 128 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 C18orf32Q8TCD1 76 aa6.28□□□□□ -1.4
CIT-216ENST00000544872 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
CIT-216ENST00000544872 FAT1Q14517 4588 aa6.27□□□□□ -1.41
CIT-216ENST00000544872 IGLV4-3A0A075B6K6 122 aa6.27□□□□□ -1.41
CIT-216ENST00000544872 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
CIT-216ENST00000544872 RNASE13Q5GAN3 156 aaKnown RBP6.27□□□□□ -1.41
CIT-216ENST00000544872 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
CIT-216ENST00000544872 PACRGQ96M98 296 aaPredicted RBP6.27□□□□□ -1.41
CIT-216ENST00000544872 YPEL4Q96NS1 127 aa6.27□□□□□ -1.41
CIT-216ENST00000544872 MUC2Q02817 5179 aa6.26□□□□□ -1.41
CIT-216ENST00000544872 IGIPA6NJ69 53 aa6.26□□□□□ -1.41
CIT-216ENST00000544872 COLCA2A8K830 154 aa6.26□□□□□ -1.41
CIT-216ENST00000544872 HERVK_113P63121 156 aa6.26□□□□□ -1.41
CIT-216ENST00000544872 PRSS1P07477 247 aa6.25□□□□□ -1.41
CIT-216ENST00000544872 PRSS2P07478 247 aa6.25□□□□□ -1.41
CIT-216ENST00000544872 FOXI1Q12951 378 aa6.25□□□□□ -1.41
CIT-216ENST00000544872 PMVKQ15126 192 aa6.25□□□□□ -1.41
CIT-216ENST00000544872 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
CIT-216ENST00000544872 F8WDY8 70 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 H3BRM9 83 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 KRTAP10-2P60368 255 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 OR10D4PQ8NGN7 298 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 HSPB8Q9UJY1 196 aa6.24□□□□□ -1.41
CIT-216ENST00000544872 VPS13BQ7Z7G8 4022 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 IGHV3-64A0A075B6Q5 118 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 SCO1O75880 301 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 UBE2D1P51668 147 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 HIGD2BQ4VC39 106 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 AMELXQ99217 191 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
CIT-216ENST00000544872 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
CIT-216ENST00000544872 ATP6V1G1O75348 118 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 XGP55808 180 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 CKS1BP61024 79 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 CNBPP62633 177 aaKnown RBP6.22□□□□□ -1.41
CIT-216ENST00000544872 KRTAP26-1Q6PEX3 210 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 LINC00469Q8N7U9 141 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 CAMK2N2Q96S95 79 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 LINC00474Q9P2X8 69 aa6.22□□□□□ -1.41
CIT-216ENST00000544872 A0A087WZ39 114 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 IGHV3OR16-9A0A0B4J2B5 98 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 LEPROTL1O95214 131 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 SPAG11BQ08648 103 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 SYCNQ0VAF6 134 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 WFDC2Q14508 124 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 PMCHL1Q16048 86 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 C6orf226Q5I0X4 101 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 LINC00242Q5T6M2 205 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 ORAOV1Q8WV07 137 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 IFI27L1Q96BM0 104 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 C2orf48Q96LS8 159 aa6.21□□□□□ -1.42
CIT-216ENST00000544872 IGLV4-69A0A075B6H9 119 aa6.2□□□□□ -1.42
CIT-216ENST00000544872 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
CIT-216ENST00000544872 CARD19Q96LW7 228 aa6.2□□□□□ -1.42
CIT-216ENST00000544872 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
CIT-216ENST00000544872 NDUFA1O15239 70 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 SERF1AO75920 110 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 C15orf56Q8N910 161 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 MAP1LC3CQ9BXW4 147 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 TOMM7Q9P0U1 55 aa6.19□□□□□ -1.42
CIT-216ENST00000544872 A0A0J9YXV3 536 aa6.18□□□□□ -1.42
CIT-216ENST00000544872 FUSP35637 526 aaKnown RBP eCLIP6.18□□□□□ -1.42
CIT-216ENST00000544872 FAM19A3Q7Z5A8 133 aa6.18□□□□□ -1.42
CIT-216ENST00000544872 CHTOPQ9Y3Y2 248 aaKnown RBP6.18□□□□□ -1.42
CIT-216ENST00000544872 LRP2P98164 4655 aa6.18□□□□□ -1.42
CIT-216ENST00000544872 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 S100A6P06703 90 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 FABP4P15090 132 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 CXCL5P42830 114 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 TMEM170BQ5T4T1 132 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 ZC2HC1BQ5TFG8 222 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 SFTA2Q6UW10 78 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 FAM19A2Q8N3H0 131 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 URB1-AS1Q96HZ7 61 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 CDKN2A-AS1Q9UH64 79 aa6.17□□□□□ -1.42
CIT-216ENST00000544872 LOC107984640A0A0U1RRK4 108 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 H0Y8G0 127 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 HIST1H2BKO60814 126 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 HIST1H2BJP06899 126 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 HIST1H2BOP23527 126 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 HIST1H2BBP33778 126 aa6.16□□□□□ -1.42
CIT-216ENST00000544872 HIST1H2BDP58876 126 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms