RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 SYCNQ0VAF6 134 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 FOXI1Q12951 378 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 HIGD2BQ4VC39 106 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 SDIM1Q6ZPB5 146 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 COMMD7Q86VX2 200 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 SVBPQ8N300 66 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 Q8N8P6 123 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 CIRBP-AS1Q8TBR5 109 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 CAMK2N2Q96S95 79 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 GNB1LQ9BYB4 327 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 SMCO4Q9NRQ5 59 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
CLSTN3-215ENST00000544584 LOC389332A0A1B0GUA5 103 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 LCE2BO14633 110 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 NDUFA1O15239 70 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 NPYP01303 97 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 PRSS2P07478 247 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 RAB5BP61020 215 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 COX6A2Q02221 97 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 RNF151Q2KHN1 245 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 MAJINQ3KP22 176 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 KRTAP26-1Q6PEX3 210 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 C2orf66Q6UXQ4 117 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
CLSTN3-215ENST00000544584 GAS8-AS1O95177 125 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 OXTP01178 125 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 S100A1P23297 94 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 RPL39P62891 51 aaKnown RBP3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 HERVK_113P63121 156 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 SPAG11BQ08648 103 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 FABP9Q0Z7S8 132 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 LINC01620Q4KN68 170 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 FA2HQ7L5A8 372 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 LINC01561Q8N1V8 128 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 C15orf56Q8N910 161 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 PACRGQ96M98 296 aaPredicted RBP3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 TIMM17AQ99595 171 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 PLA2G2DQ9UNK4 145 aa3.61□□□□□ -1.83
CLSTN3-215ENST00000544584 A0A087WZ39 114 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 IGKV2-24A0A0C4DH68 120 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 H3BRM9 83 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 CKS1BP61024 79 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 C6orf226Q5I0X4 101 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 Q6ZUT4 128 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 ERASQ7Z444 233 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 C5orf38Q86SI9 138 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 STPG4Q8N801 248 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 SPACA4Q8TDM5 124 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 SCGB3A1Q96QR1 104 aa3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
CLSTN3-215ENST00000544584 LRP2P98164 4655 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 A0A087WYN8 130 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 IGHV3OR16-9A0A0B4J2B5 98 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 APOC3P02656 99 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 CXCL5P42830 114 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 HAMPP81172 84 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 RPL18AQ02543 176 aaKnown RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 GAGE2BQ13066 116 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 RNASE13Q5GAN3 156 aaKnown RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 Q6ZRU5 148 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 TOMM6Q96B49 74 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 MRPL35Q9NZE8 188 aaKnown RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 PLAC8Q9NZF1 115 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 CARHSP1Q9Y2V2 147 aaKnown RBP3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
CLSTN3-215ENST00000544584 IGLV4-3A0A075B6K6 122 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 PTTG1IPP53801 180 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 IFITM2Q01629 132 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 C10orf91Q5T1B1 145 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 SFTA2Q6UW10 78 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 Q6ZRP5 223 aa3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 MRPL18Q9H0U6 180 aaKnown RBP3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.58□□□□□ -1.84
CLSTN3-215ENST00000544584 TINCRA0A1B0GVN0 87 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 SLPIP03973 132 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 ADCYAP1P18509 176 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 UBE2D1P51668 147 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 LINC00242Q5T6M2 205 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 Q8IZM0 81 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 LINC00469Q8N7U9 141 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 AMELXQ99217 191 aa3.57□□□□□ -1.84
CLSTN3-215ENST00000544584 A0A096LNI7 61 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 IGIPA6NJ69 53 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 ATP5LO75964 103 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 LINC00614P0C842 121 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 TLX1NBP0CAT3 122 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 PMVKQ15126 192 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 PDZD11Q5EBL8 140 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
CLSTN3-215ENST00000544584 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms