RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 SMIM20Q8N5G0 67 aa9.35□□□□□ -0.91
CHD4-211ENST00000544484 SDIM1Q6ZPB5 146 aa9.34□□□□□ -0.91
CHD4-211ENST00000544484 LINC00643Q86TS7 51 aa9.34□□□□□ -0.91
CHD4-211ENST00000544484 NANOS2P60321 138 aaKnown RBP9.34□□□□□ -0.91
CHD4-211ENST00000544484 CD164L2Q6UWJ8 174 aa9.34□□□□□ -0.91
CHD4-211ENST00000544484 MRPS12O15235 138 aaKnown RBP9.34□□□□□ -0.91
CHD4-211ENST00000544484 IGHV4-30-4P0DP06 118 aa9.34□□□□□ -0.91
CHD4-211ENST00000544484 UPK3BQ9BT76 320 aa9.34□□□□□ -0.91
CHD4-211ENST00000544484 NDUFA7O95182 113 aa9.33□□□□□ -0.92
CHD4-211ENST00000544484 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
CHD4-211ENST00000544484 A0A0J9YWU9 116 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 LELP1Q5T871 98 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 C2orf91Q6ZV80 131 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 MTORP42345 2549 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 KIR2DL5BQ8NHK3 375 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 EML5Q05BV3 1969 aa9.32□□□□□ -0.92
CHD4-211ENST00000544484 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
CHD4-211ENST00000544484 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
CHD4-211ENST00000544484 RETNQ9HD89 108 aa9.31□□□□□ -0.92
CHD4-211ENST00000544484 UBE2D1P51668 147 aa9.31□□□□□ -0.92
CHD4-211ENST00000544484 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
CHD4-211ENST00000544484 IGKV4-1P06312 121 aa9.3□□□□□ -0.92
CHD4-211ENST00000544484 FASNP49327 2511 aaKnown RBP9.3□□□□□ -0.92
CHD4-211ENST00000544484 UBE2D3P61077 147 aa9.3□□□□□ -0.92
CHD4-211ENST00000544484 UBE2D2P62837 147 aa9.3□□□□□ -0.92
CHD4-211ENST00000544484 MRGPRG-AS1Q2M3A8 158 aa9.3□□□□□ -0.92
CHD4-211ENST00000544484 POM121L12Q8N7R1 296 aa9.3□□□□□ -0.92
CHD4-211ENST00000544484 CNFNQ9BYD5 112 aa9.29□□□□□ -0.92
CHD4-211ENST00000544484 Q6ZQY7 126 aa9.29□□□□□ -0.92
CHD4-211ENST00000544484 RPL37AP8A6NKH3 93 aa9.29□□□□□ -0.92
CHD4-211ENST00000544484 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
CHD4-211ENST00000544484 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
CHD4-211ENST00000544484 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
CHD4-211ENST00000544484 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
CHD4-211ENST00000544484 CCKP06307 115 aa9.28□□□□□ -0.92
CHD4-211ENST00000544484 LINC00310P59036 64 aa9.28□□□□□ -0.92
CHD4-211ENST00000544484 CPAMD8Q8IZJ3 1885 aa9.28□□□□□ -0.92
CHD4-211ENST00000544484 MRPS36P82909 103 aaKnown RBP9.28□□□□□ -0.92
CHD4-211ENST00000544484 URB1-AS1Q96HZ7 61 aa9.27□□□□□ -0.92
CHD4-211ENST00000544484 IGIPA6NJ69 53 aa9.27□□□□□ -0.93
CHD4-211ENST00000544484 C20orf197Q8N268 126 aa9.27□□□□□ -0.93
CHD4-211ENST00000544484 BRI3O95415 125 aa9.27□□□□□ -0.93
CHD4-211ENST00000544484 LY6G6CO95867 125 aa9.27□□□□□ -0.93
CHD4-211ENST00000544484 SMIM11BQ8TCY0 68 aa9.26□□□□□ -0.93
CHD4-211ENST00000544484 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
CHD4-211ENST00000544484 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
CHD4-211ENST00000544484 POLQO75417 2590 aa9.26□□□□□ -0.93
CHD4-211ENST00000544484 TIMM17BO60830 172 aa9.26□□□□□ -0.93
CHD4-211ENST00000544484 LINC00242Q5T6M2 205 aa9.25□□□□□ -0.93
CHD4-211ENST00000544484 CYSRT1A8MQ03 144 aa9.25□□□□□ -0.93
CHD4-211ENST00000544484 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
CHD4-211ENST00000544484 M0R378 163 aa9.24□□□□□ -0.93
CHD4-211ENST00000544484 NDUFV3P56181 108 aaKnown RBP9.23□□□□□ -0.93
CHD4-211ENST00000544484 C9orf116Q5BN46 136 aaPredicted RBP9.23□□□□□ -0.93
CHD4-211ENST00000544484 SPINK6Q6UWN8 80 aa9.23□□□□□ -0.93
CHD4-211ENST00000544484 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
CHD4-211ENST00000544484 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
CHD4-211ENST00000544484 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
CHD4-211ENST00000544484 IGLV4-60A0A075B6I1 120 aa9.22□□□□□ -0.93
CHD4-211ENST00000544484 TET2Q6N021 2002 aaPredicted RBP9.22□□□□□ -0.93
CHD4-211ENST00000544484 J3KT08 172 aa9.22□□□□□ -0.93
CHD4-211ENST00000544484 LST1O00453 97 aa9.21□□□□□ -0.93
CHD4-211ENST00000544484 C7orf33Q8WU49 177 aa9.21□□□□□ -0.93
CHD4-211ENST00000544484 COX6A2Q02221 97 aa9.21□□□□□ -0.93
CHD4-211ENST00000544484 Q8IZM0 81 aa9.21□□□□□ -0.93
CHD4-211ENST00000544484 COL5A1P20908 1838 aaPredicted RBP9.21□□□□□ -0.94
CHD4-211ENST00000544484 Q6ZTC4 211 aa9.21□□□□□ -0.94
CHD4-211ENST00000544484 CHCHD7Q9BUK0 85 aa9.2□□□□□ -0.94
CHD4-211ENST00000544484 LOC107984640A0A0U1RRK4 108 aa9.2□□□□□ -0.94
CHD4-211ENST00000544484 AGRNO00468 2067 aa9.2□□□□□ -0.94
CHD4-211ENST00000544484 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
CHD4-211ENST00000544484 ZNF580Q9UK33 172 aa9.2□□□□□ -0.94
CHD4-211ENST00000544484 SMIM1B2RUZ4 78 aa9.19□□□□□ -0.94
CHD4-211ENST00000544484 ACANP16112 2415 aa9.19□□□□□ -0.94
CHD4-211ENST00000544484 Q6ZSN1 163 aa9.19□□□□□ -0.94
CHD4-211ENST00000544484 FHL2Q14192 279 aa9.19□□□□□ -0.94
CHD4-211ENST00000544484 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
CHD4-211ENST00000544484 TSPEAR-AS2P59090 65 aa9.18□□□□□ -0.94
CHD4-211ENST00000544484 IGLV9-49A0A0B4J1Y8 123 aa9.18□□□□□ -0.94
CHD4-211ENST00000544484 WFDC13Q8IUB5 93 aa9.17□□□□□ -0.94
CHD4-211ENST00000544484 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
CHD4-211ENST00000544484 DHRS4-AS1Q9P1J3 65 aa9.17□□□□□ -0.94
CHD4-211ENST00000544484 COX17Q14061 63 aa9.17□□□□□ -0.94
CHD4-211ENST00000544484 ADAMTS20P59510 1910 aa9.17□□□□□ -0.94
CHD4-211ENST00000544484 UTRNP46939 3433 aa9.16□□□□□ -0.94
CHD4-211ENST00000544484 PLAC8L1A1L4L8 177 aa9.16□□□□□ -0.94
CHD4-211ENST00000544484 ATP5EP2Q5VTU8 51 aa9.15□□□□□ -0.94
CHD4-211ENST00000544484 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
CHD4-211ENST00000544484 UQCRQO14949 82 aa9.15□□□□□ -0.94
CHD4-211ENST00000544484 C16orf95Q9H693 158 aa9.15□□□□□ -0.95
CHD4-211ENST00000544484 A0A096LNJ9 63 aa9.14□□□□□ -0.95
CHD4-211ENST00000544484 DNAH12Q6ZR08 3092 aa9.14□□□□□ -0.95
CHD4-211ENST00000544484 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
CHD4-211ENST00000544484 C6orf223Q8N319 242 aa9.14□□□□□ -0.95
CHD4-211ENST00000544484 ADAMTSL4-AS1Q5T5F5 129 aa9.13□□□□□ -0.95
CHD4-211ENST00000544484 TRBV10-3A0A0K0K1G6 114 aa9.13□□□□□ -0.95
CHD4-211ENST00000544484 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
CHD4-211ENST00000544484 SEC61GP60059 68 aa9.12□□□□□ -0.95
CHD4-211ENST00000544484 M0QXV9 152 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms