RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 CYSRT1A8MQ03 144 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 Q6ZSV7 163 aa7.62□□□□□ -1.19
PCDH9-204ENST00000544246 DENND4CQ5VZ89 1909 aa7.61□□□□□ -1.19
PCDH9-204ENST00000544246 Q8NA96 180 aa7.61□□□□□ -1.19
PCDH9-204ENST00000544246 MED12Q93074 2177 aa7.61□□□□□ -1.19
PCDH9-204ENST00000544246 PTPN13Q12923 2485 aa7.61□□□□□ -1.19
PCDH9-204ENST00000544246 Q6ZS46 218 aa7.6□□□□□ -1.19
PCDH9-204ENST00000544246 DOCK10Q96BY6 2186 aa7.6□□□□□ -1.19
PCDH9-204ENST00000544246 PLA2G1BP04054 148 aaKnown RBP7.6□□□□□ -1.19
PCDH9-204ENST00000544246 C2orf91Q6ZV80 131 aa7.6□□□□□ -1.19
PCDH9-204ENST00000544246 LINC00574Q9H8X3 128 aa7.6□□□□□ -1.19
PCDH9-204ENST00000544246 Q9BRP9 147 aa7.59□□□□□ -1.19
PCDH9-204ENST00000544246 IGLV5-52A0A0A0MRZ9 124 aa7.59□□□□□ -1.19
PCDH9-204ENST00000544246 EGFEM1PQ0D2K5 195 aa7.59□□□□□ -1.19
PCDH9-204ENST00000544246 A0A087WVE0 104 aa7.59□□□□□ -1.19
PCDH9-204ENST00000544246 FSHBP01225 129 aa7.59□□□□□ -1.19
PCDH9-204ENST00000544246 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
PCDH9-204ENST00000544246 MRGPRG-AS1Q2M3A8 158 aa7.58□□□□□ -1.2
PCDH9-204ENST00000544246 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
PCDH9-204ENST00000544246 MSMPQ1L6U9 139 aa7.58□□□□□ -1.2
PCDH9-204ENST00000544246 CDC42SE2Q9NRR3 84 aa7.58□□□□□ -1.2
PCDH9-204ENST00000544246 ZNF702PQ9H963 129 aa7.58□□□□□ -1.2
PCDH9-204ENST00000544246 GTF3C1Q12789 2109 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 TMEM131Q92545 1883 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 OBSL1O75147 1896 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 A0A087WYN8 130 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 C6orf223Q8N319 242 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 Q8N3U1 123 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 IGF2RP11717 2491 aa7.57□□□□□ -1.2
PCDH9-204ENST00000544246 HCG22E2RYF7 251 aa7.56□□□□□ -1.2
PCDH9-204ENST00000544246 C7orf65Q6ZTY9 151 aa7.56□□□□□ -1.2
PCDH9-204ENST00000544246 LIMD2Q9BT23 127 aa7.56□□□□□ -1.2
PCDH9-204ENST00000544246 LINC01556Q5JQF7 62 aa7.56□□□□□ -1.2
PCDH9-204ENST00000544246 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
PCDH9-204ENST00000544246 C19orf84I3L1E1 186 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 PRLHP81277 87 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 C10orf99Q6UWK7 81 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 UNQ6190/PRO20217Q6UXQ8 127 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 SBSPONQ8IVN8 264 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 LY6G6DO95868 133 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 IGLV2-11P01706 119 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 VPREB1P12018 145 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 SPAG11AQ6PDA7 123 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 DENND4AQ7Z401 1863 aa7.55□□□□□ -1.2
PCDH9-204ENST00000544246 POLR2KP53803 58 aaKnown RBP7.55□□□□□ -1.2
PCDH9-204ENST00000544246 PRR9Q5T870 116 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 A0A1B0GU69 56 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 DYSFO75923 2080 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 KLLNB2CW77 178 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 FSTL3O95633 263 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 BRWD1-AS2P59051 145 aa7.54□□□□□ -1.2
PCDH9-204ENST00000544246 C1orf229Q6ZS94 237 aaPredicted RBP7.54□□□□□ -1.2
PCDH9-204ENST00000544246 A0A087WSZ3 146 aa7.53□□□□□ -1.2
PCDH9-204ENST00000544246 CADP27708 2225 aa7.53□□□□□ -1.2
PCDH9-204ENST00000544246 C9orf116Q5BN46 136 aaPredicted RBP7.53□□□□□ -1.2
PCDH9-204ENST00000544246 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
PCDH9-204ENST00000544246 F8WDY8 70 aa7.52□□□□□ -1.21
PCDH9-204ENST00000544246 EIF4EBP1Q13541 118 aaPredicted RBP7.52□□□□□ -1.21
PCDH9-204ENST00000544246 DEFB116Q30KQ4 102 aa7.52□□□□□ -1.21
PCDH9-204ENST00000544246 CHCHD7Q9BUK0 85 aa7.52□□□□□ -1.21
PCDH9-204ENST00000544246 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.21
PCDH9-204ENST00000544246 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
PCDH9-204ENST00000544246 C2orf48Q96LS8 159 aa7.51□□□□□ -1.21
PCDH9-204ENST00000544246 C18orf65Q6ZTR6 163 aa7.51□□□□□ -1.21
PCDH9-204ENST00000544246 MED13Q9UHV7 2174 aa7.51□□□□□ -1.21
PCDH9-204ENST00000544246 CRIP2P52943 208 aaPredicted RBP7.51□□□□□ -1.21
PCDH9-204ENST00000544246 C11orf21Q9P2W6 132 aa7.51□□□□□ -1.21
PCDH9-204ENST00000544246 HIVEP2P31629 2446 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 CXCL6P80162 114 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 KIAA1549LQ6ZVL6 1849 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 WNK2Q9Y3S1 2297 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 LINC01006Q8NI28 216 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.5□□□□□ -1.21
PCDH9-204ENST00000544246 SMIM1B2RUZ4 78 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 YPEL4Q96NS1 127 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 ATRXP46100 2492 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 SPINT4Q6UDR6 99 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 PRM2P04554 102 aa7.5□□□□□ -1.21
PCDH9-204ENST00000544246 IGIPA6NJ69 53 aa7.49□□□□□ -1.21
PCDH9-204ENST00000544246 PRR3P79522 188 aaKnown RBP7.49□□□□□ -1.21
PCDH9-204ENST00000544246 UTRNP46939 3433 aa7.49□□□□□ -1.21
PCDH9-204ENST00000544246 COX6A2Q02221 97 aa7.49□□□□□ -1.21
PCDH9-204ENST00000544246 Q8N6K4 173 aa7.48□□□□□ -1.21
PCDH9-204ENST00000544246 CHD8Q9HCK8 2581 aa7.48□□□□□ -1.21
PCDH9-204ENST00000544246 ACYP2P14621 99 aa7.47□□□□□ -1.21
PCDH9-204ENST00000544246 SPTBN4Q9H254 2564 aa7.47□□□□□ -1.21
PCDH9-204ENST00000544246 ABCA1O95477 2261 aa7.47□□□□□ -1.21
PCDH9-204ENST00000544246 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
PCDH9-204ENST00000544246 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
PCDH9-204ENST00000544246 IGLV1-40P01703 118 aa7.46□□□□□ -1.21
PCDH9-204ENST00000544246 Q9UF83 564 aa7.46□□□□□ -1.21
PCDH9-204ENST00000544246 Q6ZTC4 211 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms