RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 Q6ZQY7 126 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 C5orf56Q8N8D9 126 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 DEFB124Q8NES8 71 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 ATP6V0E2Q8NHE4 81 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 TSKUQ8WUA8 353 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 C10orf82Q8WW14 230 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 SEC11CQ9BY50 192 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 ATG5Q9H1Y0 275 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 MRPL35Q9NZE8 188 aaKnown RBP0.47□□□□□ -2.33
CCDC170-203ENST00000544131 NDUFA12Q9UI09 145 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 ITPR1Q14643 2758 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 NSD1Q96L73 2696 aaPredicted RBP0.47□□□□□ -2.33
CCDC170-203ENST00000544131 C4AP0C0L4 1744 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 DDX60LQ5H9U9 1706 aaKnown RBP0.47□□□□□ -2.33
CCDC170-203ENST00000544131 NALCNQ8IZF0 1738 aa0.47□□□□□ -2.33
CCDC170-203ENST00000544131 FRYLO94915 3013 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 CRYBG3Q68DQ2 2970 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 IQGAP2Q13576 1575 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 ZNF236Q9UL36 1845 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 PDZD2O15018 2839 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 TRBV10-1A0A0K0K1A3 114 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 CXorf51AA0A1B0GTR3 108 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 SNCGO76070 127 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 IL5P05113 134 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 PYYP10082 97 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 COX6B1P14854 86 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 SPINT3P49223 89 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 ASB16-AS1Q495Z4 193 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 CCSMST1Q4G0I0 132 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 MEIG1Q5JSS6 88 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 ATP11AUNQ6ZP68 121 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 SMIM5Q71RC9 77 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 KCNRGQ8N5I3 272 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 SPTSSBQ8NFR3 76 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 PLAC4Q8WY50 150 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 ARL11Q969Q4 196 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 PDCD10Q9BUL8 212 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 LINC00470Q9BZP3 86 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 TMEM242Q9NWH2 141 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 PAIP2BQ9ULR5 123 aaKnown RBP0.46□□□□□ -2.34
CCDC170-203ENST00000544131 TRPM2O94759 1503 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 KDM3BQ7LBC6 1761 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 WDR87Q6ZQQ6 2873 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 TROQ12816 1431 aaPredicted RBP0.46□□□□□ -2.34
CCDC170-203ENST00000544131 AKAP6Q13023 2319 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 LAMC1P11047 1609 aa0.46□□□□□ -2.34
CCDC170-203ENST00000544131 SPENQ96T58 3664 aaKnown RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 WNK2Q9Y3S1 2297 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 CDC42BPGQ6DT37 1551 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 VPS13CQ709C8 3753 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 RGPD8O14715 1765 aaPredicted RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 RGPD5Q99666 1765 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 MYO5CQ9NQX4 1742 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 TOGARAM1Q9Y4F4 1720 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 LCE6AA0A183 80 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 TCRBV3S1A0A5B6 114 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 LOC730098B7Z3J9 87 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 CCDC179H3BU77 68 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 RBM3P98179 157 aaKnown RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 SPCS2Q15005 226 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 XAF1Q6GPH4 301 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 OR2T2Q6IF00 324 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 RPL13AP3Q6NVV1 102 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 VSTM2AQ8TAG5 236 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 LSM10Q969L4 123 aaKnown RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 DPH3Q96FX2 82 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 DMAC1Q96GE9 116 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 PLCE1Q9P212 2302 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 BTAF1O14981 1849 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 GOLGA4Q13439 2230 aaKnown RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 LOC400499M0QZD8 3231 aa0.45□□□□□ -2.34
CCDC170-203ENST00000544131 ROCK2O75116 1388 aaKnown RBP0.45□□□□□ -2.34
CCDC170-203ENST00000544131 MYO15AQ9UKN7 3530 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 KNL1Q8NG31 2342 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 MYO7BQ6PIF6 2116 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 CELSR1Q9NYQ6 3014 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 VPS13AQ96RL7 3174 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 QRICH2Q9H0J4 1663 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 PLXNB2O15031 1838 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 LINC00587B1AMM8 73 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 K7EP13 123 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 YPEL1O60688 119 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 NCR2O95944 276 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 GUCA1AP43080 201 aaPredicted RBP0.44□□□□□ -2.34
CCDC170-203ENST00000544131 CAV3P56539 151 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 EMX2Q04743 252 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 RPL7L1Q6DKI1 246 aaKnown RBP0.44□□□□□ -2.34
CCDC170-203ENST00000544131 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 C20orf197Q8N268 126 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 TMEM141Q96I45 108 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 SAR1AQ9NR31 198 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 LINC00846Q9NV44 126 aa0.44□□□□□ -2.34
CCDC170-203ENST00000544131 EIF2AK4Q9P2K8 1649 aaKnown RBP0.44□□□□□ -2.34
CCDC170-203ENST00000544131 MYOM3Q5VTT5 1437 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms