RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 APOMO95445 188 aa11.98□□□□□ -0.49
PTPRO-209ENST00000543886 KRTAP24-1Q3LI83 254 aa11.98□□□□□ -0.49
PTPRO-209ENST00000543886 ATP6V0E2Q8NHE4 81 aa11.98□□□□□ -0.49
PTPRO-209ENST00000543886 MIFP14174 115 aa11.97□□□□□ -0.49
PTPRO-209ENST00000543886 DAD1P61803 113 aa11.96□□□□□ -0.5
PTPRO-209ENST00000543886 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
PTPRO-209ENST00000543886 PAX4O43316 350 aa11.95□□□□□ -0.5
PTPRO-209ENST00000543886 MTURNQ8N3F0 131 aa11.95□□□□□ -0.5
PTPRO-209ENST00000543886 Q8NAQ8 132 aa11.95□□□□□ -0.5
PTPRO-209ENST00000543886 RNF183Q96D59 192 aa11.95□□□□□ -0.5
PTPRO-209ENST00000543886 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
PTPRO-209ENST00000543886 NDUFA1O15239 70 aa11.94□□□□□ -0.5
PTPRO-209ENST00000543886 MUSTN1Q8IVN3 82 aa11.94□□□□□ -0.5
PTPRO-209ENST00000543886 C3orf56Q8N813 242 aa11.94□□□□□ -0.5
PTPRO-209ENST00000543886 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 CFC1BP0CG36 223 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 CFC1P0CG37 223 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 LITAFQ99732 161 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 A0A1B0GV72 72 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 A4D1N5 150 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 TSPAN13O95857 204 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 OXLD1Q5BKU9 147 aa11.93□□□□□ -0.5
PTPRO-209ENST00000543886 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
PTPRO-209ENST00000543886 FOXI1Q12951 378 aa11.92□□□□□ -0.5
PTPRO-209ENST00000543886 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 LOC107984156A0A0G2JMH3 177 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 ARL17AQ8IVW1 177 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 SPANXDQ9BXN6 97 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 SPANXCQ9NY87 97 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 F5H768 121 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 PRSS2P07478 247 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 SPART-AS1P0CW21 52 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 PSMB2P49721 201 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 PRO1854Q9UHT4 67 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 CELA1Q9UNI1 258 aa11.91□□□□□ -0.5
PTPRO-209ENST00000543886 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
PTPRO-209ENST00000543886 TIMM17BO60830 172 aa11.9□□□□□ -0.5
PTPRO-209ENST00000543886 ATP5G1P05496 136 aa11.9□□□□□ -0.5
PTPRO-209ENST00000543886 MIAQ16674 131 aa11.9□□□□□ -0.5
PTPRO-209ENST00000543886 SHISA2Q6UWI4 295 aa11.9□□□□□ -0.5
PTPRO-209ENST00000543886 A0A096LPF7 62 aa11.9□□□□□ -0.51
PTPRO-209ENST00000543886 ADAMTSL4-AS1Q5T5F5 129 aa11.9□□□□□ -0.51
PTPRO-209ENST00000543886 Q9H8V8 135 aa11.9□□□□□ -0.51
PTPRO-209ENST00000543886 TRBV20-1A0A075B6N2 111 aa11.89□□□□□ -0.51
PTPRO-209ENST00000543886 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
PTPRO-209ENST00000543886 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
PTPRO-209ENST00000543886 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
PTPRO-209ENST00000543886 CYSRT1A8MQ03 144 aa11.88□□□□□ -0.51
PTPRO-209ENST00000543886 SMCPP49901 116 aaPredicted RBP11.88□□□□□ -0.51
PTPRO-209ENST00000543886 KRTAP10-11P60412 298 aa11.88□□□□□ -0.51
PTPRO-209ENST00000543886 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
PTPRO-209ENST00000543886 TRAV26-1A0A087WT03 109 aa11.86□□□□□ -0.51
PTPRO-209ENST00000543886 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
PTPRO-209ENST00000543886 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
PTPRO-209ENST00000543886 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
PTPRO-209ENST00000543886 A0A1B0GUV1 79 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 HTN3P15516 51 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 NPC2P61916 151 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 TEN1Q86WV5 123 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 IFITM1P13164 125 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 EGFEM1PQ0D2K5 195 aa11.85□□□□□ -0.51
PTPRO-209ENST00000543886 HERV-K104P63124 156 aa11.84□□□□□ -0.51
PTPRO-209ENST00000543886 ZNF625Q96I27 306 aaPredicted RBP11.84□□□□□ -0.51
PTPRO-209ENST00000543886 ERG28Q9UKR5 140 aa11.84□□□□□ -0.51
PTPRO-209ENST00000543886 LINC00959A0A1B0GUT2 108 aa11.83□□□□□ -0.51
PTPRO-209ENST00000543886 EIF4EBP3O60516 100 aaPredicted RBP11.83□□□□□ -0.51
PTPRO-209ENST00000543886 STAB1Q9NY15 2570 aa11.83□□□□□ -0.52
PTPRO-209ENST00000543886 TCL1BO95988 128 aa11.83□□□□□ -0.52
PTPRO-209ENST00000543886 IGHV3-33P01772 117 aa11.83□□□□□ -0.52
PTPRO-209ENST00000543886 DAND5Q8N907 189 aa11.83□□□□□ -0.52
PTPRO-209ENST00000543886 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 CKS1BP61024 79 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 H7C2G1 150 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 SS18Q15532 418 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
PTPRO-209ENST00000543886 Q1RN00 199 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
PTPRO-209ENST00000543886 SCGB1C2P0DMR2 95 aa11.81□□□□□ -0.52
PTPRO-209ENST00000543886 A0A087WZ39 114 aa11.8□□□□□ -0.52
PTPRO-209ENST00000543886 COPS9Q8WXC6 57 aa11.8□□□□□ -0.52
PTPRO-209ENST00000543886 RETNQ9HD89 108 aa11.8□□□□□ -0.52
PTPRO-209ENST00000543886 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
PTPRO-209ENST00000543886 ICOSQ9Y6W8 199 aa11.8□□□□□ -0.52
PTPRO-209ENST00000543886 MAST4O15021 2626 aa11.79□□□□□ -0.52
PTPRO-209ENST00000543886 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
PTPRO-209ENST00000543886 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
PTPRO-209ENST00000543886 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
PTPRO-209ENST00000543886 LINC00308Q8TCZ7 52 aa11.79□□□□□ -0.52
PTPRO-209ENST00000543886 M0QXV9 152 aa11.78□□□□□ -0.52
PTPRO-209ENST00000543886 XCL1P47992 114 aa11.78□□□□□ -0.52
PTPRO-209ENST00000543886 CARD19Q96LW7 228 aa11.78□□□□□ -0.52
PTPRO-209ENST00000543886 LINC00269Q8N2A0 174 aa11.76□□□□□ -0.53
PTPRO-209ENST00000543886 ANGP03950 147 aaKnown RBP11.75□□□□□ -0.53
PTPRO-209ENST00000543886 ANKRD29Q8N6D5 301 aa11.75□□□□□ -0.53
PTPRO-209ENST00000543886 PKD1L1Q8TDX9 2849 aa11.75□□□□□ -0.53
PTPRO-209ENST00000543886 LELP1Q5T871 98 aa11.75□□□□□ -0.53
PTPRO-209ENST00000543886 SLC25A20O43772 301 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms