RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 C20orf78Q9BR46 151 aa13.68□□□□□ -0.22
CDKN3-207ENST00000543789 TLX1NBP0CAT3 122 aa13.67□□□□□ -0.22
CDKN3-207ENST00000543789 C10orf25Q5T742 122 aa13.67□□□□□ -0.22
CDKN3-207ENST00000543789 NAT8BQ9UHF3 227 aa13.67□□□□□ -0.22
CDKN3-207ENST00000543789 IGLV1-50A0A075B6I6 118 aa13.66□□□□□ -0.22
CDKN3-207ENST00000543789 LINC00862A6NCI5 91 aa13.66□□□□□ -0.22
CDKN3-207ENST00000543789 TCAPO15273 167 aa13.66□□□□□ -0.22
CDKN3-207ENST00000543789 RPL39P62891 51 aaKnown RBP13.66□□□□□ -0.22
CDKN3-207ENST00000543789 FAM104AQ969W3 186 aa13.66□□□□□ -0.22
CDKN3-207ENST00000543789 TRBV24-1A0A075B6N3 115 aa13.65□□□□□ -0.22
CDKN3-207ENST00000543789 RPL32P62910 135 aaKnown RBP13.65□□□□□ -0.22
CDKN3-207ENST00000543789 UNQ6190/PRO20217Q6UXQ8 127 aa13.65□□□□□ -0.22
CDKN3-207ENST00000543789 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
CDKN3-207ENST00000543789 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
CDKN3-207ENST00000543789 SPANXA1Q9NS26 97 aa13.64□□□□□ -0.23
CDKN3-207ENST00000543789 C6orf48Q9UBA6 75 aa13.64□□□□□ -0.23
CDKN3-207ENST00000543789 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
CDKN3-207ENST00000543789 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
CDKN3-207ENST00000543789 CKS2P33552 79 aa13.63□□□□□ -0.23
CDKN3-207ENST00000543789 MRPS36P82909 103 aaKnown RBP13.63□□□□□ -0.23
CDKN3-207ENST00000543789 HBBP68871 147 aa13.62□□□□□ -0.23
CDKN3-207ENST00000543789 SMDT1Q9H4I9 107 aa13.62□□□□□ -0.23
CDKN3-207ENST00000543789 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
CDKN3-207ENST00000543789 TNFRSF6BO95407 300 aa13.61□□□□□ -0.23
CDKN3-207ENST00000543789 KRTAP1-4P0C5Y4 121 aa13.61□□□□□ -0.23
CDKN3-207ENST00000543789 FAM74A3Q4VXF1 159 aa13.61□□□□□ -0.23
CDKN3-207ENST00000543789 KRTAP7-1Q8IUC3 87 aa13.6□□□□□ -0.23
CDKN3-207ENST00000543789 UBE2D1P51668 147 aa13.59□□□□□ -0.23
CDKN3-207ENST00000543789 UBE2BP63146 152 aa13.59□□□□□ -0.23
CDKN3-207ENST00000543789 SMIM2Q9BVW6 85 aa13.59□□□□□ -0.23
CDKN3-207ENST00000543789 A0A1B0GW15 77 aa13.58□□□□□ -0.24
CDKN3-207ENST00000543789 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.24
CDKN3-207ENST00000543789 M0QXV9 152 aa13.58□□□□□ -0.24
CDKN3-207ENST00000543789 PRR4Q16378 134 aa13.58□□□□□ -0.24
CDKN3-207ENST00000543789 TGIF2-C20orf24A0A0A6YYL0 155 aa13.57□□□□□ -0.24
CDKN3-207ENST00000543789 RPL23P62829 140 aaKnown RBP13.57□□□□□ -0.24
CDKN3-207ENST00000543789 KIAA0087Q14695 138 aa13.57□□□□□ -0.24
CDKN3-207ENST00000543789 RPL13AP40429 203 aaKnown RBP13.56□□□□□ -0.24
CDKN3-207ENST00000543789 D6R8Y8 96 aa13.55□□□□□ -0.24
CDKN3-207ENST00000543789 ADIRFQ15847 76 aa13.55□□□□□ -0.24
CDKN3-207ENST00000543789 TRBV30A0A0K0K1B3 111 aa13.54□□□□□ -0.24
CDKN3-207ENST00000543789 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
CDKN3-207ENST00000543789 F8W036 122 aa13.53□□□□□ -0.24
CDKN3-207ENST00000543789 NPYP01303 97 aa13.53□□□□□ -0.24
CDKN3-207ENST00000543789 IFI27P40305 119 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-207ENST00000543789 LINC00242Q5T6M2 205 aa13.52□□□□□ -0.25
CDKN3-207ENST00000543789 C2orf82Q6UX34 121 aa13.52□□□□□ -0.25
CDKN3-207ENST00000543789 PACRGQ96M98 296 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-207ENST00000543789 NAT8Q9UHE5 227 aa13.52□□□□□ -0.25
CDKN3-207ENST00000543789 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.25
CDKN3-207ENST00000543789 MUC2Q02817 5179 aa13.51□□□□□ -0.25
CDKN3-207ENST00000543789 PPBPP02775 128 aa13.51□□□□□ -0.25
CDKN3-207ENST00000543789 S100A8P05109 93 aa13.51□□□□□ -0.25
CDKN3-207ENST00000543789 C9orf129Q5T035 196 aaKnown RBP13.51□□□□□ -0.25
CDKN3-207ENST00000543789 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
CDKN3-207ENST00000543789 RAB5AP20339 215 aa13.5□□□□□ -0.25
CDKN3-207ENST00000543789 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
CDKN3-207ENST00000543789 IGLV4-3A0A075B6K6 122 aa13.48□□□□□ -0.25
CDKN3-207ENST00000543789 ZNF861PO60384 105 aa13.48□□□□□ -0.25
CDKN3-207ENST00000543789 C9JQL5 133 aa13.47□□□□□ -0.25
CDKN3-207ENST00000543789 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
CDKN3-207ENST00000543789 TMEM141Q96I45 108 aa13.47□□□□□ -0.25
CDKN3-207ENST00000543789 A0A1B0GXF2 115 aa13.46□□□□□ -0.25
CDKN3-207ENST00000543789 ORMDL3Q8N138 153 aa13.46□□□□□ -0.25
CDKN3-207ENST00000543789 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
CDKN3-207ENST00000543789 A0A0U1RQV1 116 aa13.44□□□□□ -0.26
CDKN3-207ENST00000543789 TEX43Q6ZNM6 134 aa13.44□□□□□ -0.26
CDKN3-207ENST00000543789 PRELID3AQ96N28 172 aa13.43□□□□□ -0.26
CDKN3-207ENST00000543789 C22orf24Q9Y442 160 aa13.43□□□□□ -0.26
CDKN3-207ENST00000543789 NUPR1O60356 82 aa13.42□□□□□ -0.26
CDKN3-207ENST00000543789 TSPAN13O95857 204 aa13.42□□□□□ -0.26
CDKN3-207ENST00000543789 PRSS2P07478 247 aa13.42□□□□□ -0.26
CDKN3-207ENST00000543789 C2orf88Q9BSF0 95 aa13.42□□□□□ -0.26
CDKN3-207ENST00000543789 CKS1BP61024 79 aa13.41□□□□□ -0.26
CDKN3-207ENST00000543789 PEA15Q15121 130 aa13.41□□□□□ -0.26
CDKN3-207ENST00000543789 LBHQ53QV2 105 aaPredicted RBP13.41□□□□□ -0.26
CDKN3-207ENST00000543789 Q6ZN92 141 aa13.41□□□□□ -0.26
CDKN3-207ENST00000543789 LINC00469Q8N7U9 141 aa13.41□□□□□ -0.26
CDKN3-207ENST00000543789 SRSF3P84103 164 aaKnown RBP13.4□□□□□ -0.26
CDKN3-207ENST00000543789 C6orf226Q5I0X4 101 aa13.4□□□□□ -0.26
CDKN3-207ENST00000543789 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
CDKN3-207ENST00000543789 LOC389332A0A1B0GUA5 103 aa13.39□□□□□ -0.27
CDKN3-207ENST00000543789 PRSS47A8MTI9 375 aa13.39□□□□□ -0.27
CDKN3-207ENST00000543789 ZC2HC1BQ5TFG8 222 aa13.39□□□□□ -0.27
CDKN3-207ENST00000543789 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
CDKN3-207ENST00000543789 VCX2Q9H322 139 aa13.39□□□□□ -0.27
CDKN3-207ENST00000543789 ATP5L2Q7Z4Y8 100 aa13.38□□□□□ -0.27
CDKN3-207ENST00000543789 XAGE1AQ9HD64 81 aa13.38□□□□□ -0.27
CDKN3-207ENST00000543789 AMELXQ99217 191 aa13.37□□□□□ -0.27
CDKN3-207ENST00000543789 CYSLTR1Q9Y271 337 aa13.37□□□□□ -0.27
CDKN3-207ENST00000543789 LINC00173Q6ZV60 143 aa13.36□□□□□ -0.27
CDKN3-207ENST00000543789 Q8IZM0 81 aa13.36□□□□□ -0.27
CDKN3-207ENST00000543789 ALKBH7Q9BT30 221 aaPredicted RBP13.36□□□□□ -0.27
CDKN3-207ENST00000543789 MAP1LC3AQ9H492 121 aa13.36□□□□□ -0.27
CDKN3-207ENST00000543789 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
CDKN3-207ENST00000543789 C2orf66Q6UXQ4 117 aa13.35□□□□□ -0.27
CDKN3-207ENST00000543789 RPL28P46779 137 aaKnown RBP13.34□□□□□ -0.27
CDKN3-207ENST00000543789 TP73-AS1Q9UF72 201 aa13.34□□□□□ -0.27
CDKN3-207ENST00000543789 A0A087X002 238 aa13.33□□□□□ -0.28
CDKN3-207ENST00000543789 RAB14P61106 215 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms