RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 SMIM11BQ8TCY0 68 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 FAM19A5Q7Z5A7 132 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-215ENST00000543185 Q8IZM0 81 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 RETNQ9HD89 108 aa14.42□□□□□ -0.1
HDAC4-215ENST00000543185 ZFAND3Q9H8U3 227 aa14.41□□□□□ -0.1
HDAC4-215ENST00000543185 POLQO75417 2590 aa14.41□□□□□ -0.1
HDAC4-215ENST00000543185 TSHBP01222 138 aa14.41□□□□□ -0.1
HDAC4-215ENST00000543185 C10orf25Q5T742 122 aa14.41□□□□□ -0.1
HDAC4-215ENST00000543185 ZFP36P26651 326 aaKnown RBP14.4□□□□□ -0.1
HDAC4-215ENST00000543185 SYCNQ0VAF6 134 aa14.4□□□□□ -0.1
HDAC4-215ENST00000543185 ESM1Q9NQ30 184 aa14.4□□□□□ -0.1
HDAC4-215ENST00000543185 A6NDX4 124 aa14.4□□□□□ -0.1
HDAC4-215ENST00000543185 TNFRSF13BO14836 293 aaPredicted RBP14.4□□□□□ -0.11
HDAC4-215ENST00000543185 CSDC2Q9Y534 153 aaKnown RBP14.39□□□□□ -0.11
HDAC4-215ENST00000543185 PRO0628Q9UI54 55 aa14.39□□□□□ -0.11
HDAC4-215ENST00000543185 NTM-AS1Q6ZSK4 140 aa14.39□□□□□ -0.11
HDAC4-215ENST00000543185 FLG2Q5D862 2391 aaPredicted RBP14.39□□□□□ -0.11
HDAC4-215ENST00000543185 UBE2D1P51668 147 aa14.39□□□□□ -0.11
HDAC4-215ENST00000543185 HILS1P60008 231 aa14.39□□□□□ -0.11
HDAC4-215ENST00000543185 EBI3Q14213 229 aa14.39□□□□□ -0.11
HDAC4-215ENST00000543185 ZNF295-AS1Q8N0V1 137 aa14.38□□□□□ -0.11
HDAC4-215ENST00000543185 VPREB1P12018 145 aa14.38□□□□□ -0.11
HDAC4-215ENST00000543185 RPL28P46779 137 aaKnown RBP14.38□□□□□ -0.11
HDAC4-215ENST00000543185 Q8N814 137 aa14.36□□□□□ -0.11
HDAC4-215ENST00000543185 LOC107984640A0A0U1RRK4 108 aa14.36□□□□□ -0.11
HDAC4-215ENST00000543185 LIMD2Q9BT23 127 aa14.36□□□□□ -0.11
HDAC4-215ENST00000543185 WFDC13Q8IUB5 93 aa14.35□□□□□ -0.11
HDAC4-215ENST00000543185 KLLNB2CW77 178 aa14.35□□□□□ -0.11
HDAC4-215ENST00000543185 Q8N976 141 aa14.35□□□□□ -0.11
HDAC4-215ENST00000543185 CRIP1P50238 77 aa14.34□□□□□ -0.11
HDAC4-215ENST00000543185 PRRC2CQ9Y520 2896 aaKnown RBP14.34□□□□□ -0.11
HDAC4-215ENST00000543185 IGLV4-69A0A075B6H9 119 aa14.34□□□□□ -0.11
HDAC4-215ENST00000543185 TRBV7-6A0A0J9YX20 115 aa14.34□□□□□ -0.11
HDAC4-215ENST00000543185 GRNP28799 593 aaKnown RBP14.33□□□□□ -0.11
HDAC4-215ENST00000543185 DEFB114Q30KQ6 69 aa14.33□□□□□ -0.12
HDAC4-215ENST00000543185 CXCL6P80162 114 aa14.33□□□□□ -0.12
HDAC4-215ENST00000543185 FAM30AQ9NZY2 134 aa14.33□□□□□ -0.12
HDAC4-215ENST00000543185 DEFB4AO15263 64 aa14.33□□□□□ -0.12
HDAC4-215ENST00000543185 C22orf34Q6ZV56 151 aa14.32□□□□□ -0.12
HDAC4-215ENST00000543185 DNAJC9-AS1A6NH13 148 aa14.32□□□□□ -0.12
HDAC4-215ENST00000543185 F8WDY8 70 aa14.32□□□□□ -0.12
HDAC4-215ENST00000543185 XAGE1AQ9HD64 81 aa14.32□□□□□ -0.12
HDAC4-215ENST00000543185 CHD8Q9HCK8 2581 aa14.32□□□□□ -0.12
HDAC4-215ENST00000543185 LY6LH3BQJ8 138 aa14.31□□□□□ -0.12
HDAC4-215ENST00000543185 PRORYQ9H606 182 aa14.31□□□□□ -0.12
HDAC4-215ENST00000543185 IGKV2-28A0A075B6P5 120 aa14.31□□□□□ -0.12
HDAC4-215ENST00000543185 IGKV2D-28P01615 120 aa14.31□□□□□ -0.12
HDAC4-215ENST00000543185 NRGNQ92686 78 aa14.31□□□□□ -0.12
HDAC4-215ENST00000543185 A0A0J9YWU9 116 aa14.3□□□□□ -0.12
HDAC4-215ENST00000543185 LELP1Q5T871 98 aa14.3□□□□□ -0.12
HDAC4-215ENST00000543185 DEFB1P60022 68 aa14.3□□□□□ -0.12
HDAC4-215ENST00000543185 DCANP1Q8TF63 244 aa14.3□□□□□ -0.12
HDAC4-215ENST00000543185 POLR2KP53803 58 aaKnown RBP14.3□□□□□ -0.12
HDAC4-215ENST00000543185 PCSK5Q92824 1860 aa14.29□□□□□ -0.12
HDAC4-215ENST00000543185 DEFB131BA0A096LNP1 70 aa14.28□□□□□ -0.12
HDAC4-215ENST00000543185 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-215ENST00000543185 hDV103S1A0JD37 113 aa14.27□□□□□ -0.12
HDAC4-215ENST00000543185 RNASE3P12724 160 aaKnown RBP14.27□□□□□ -0.13
HDAC4-215ENST00000543185 BRWD1-AS2P59051 145 aa14.26□□□□□ -0.13
HDAC4-215ENST00000543185 Q6ZVQ6 151 aa14.26□□□□□ -0.13
HDAC4-215ENST00000543185 Q8N3U1 123 aa14.25□□□□□ -0.13
HDAC4-215ENST00000543185 TRBV7-7A0A0K0K1E9 115 aa14.25□□□□□ -0.13
HDAC4-215ENST00000543185 TRBV10-3A0A0K0K1G6 114 aa14.25□□□□□ -0.13
HDAC4-215ENST00000543185 IGIPA6NJ69 53 aa14.24□□□□□ -0.13
HDAC4-215ENST00000543185 RPS28P62857 69 aaKnown RBP14.24□□□□□ -0.13
HDAC4-215ENST00000543185 ADORA2A-AS1P86434 159 aa14.24□□□□□ -0.13
HDAC4-215ENST00000543185 ESRGQ1W209 222 aa14.24□□□□□ -0.13
HDAC4-215ENST00000543185 PRR4Q16378 134 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 CELA1Q9UNI1 258 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 A8MZ25 164 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 Q6YL49 198 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 Q6ZS46 218 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 C1orf137Q5JT78 98 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 CEP295Q9C0D2 2601 aa14.23□□□□□ -0.13
HDAC4-215ENST00000543185 USP24Q9UPU5 2620 aa14.22□□□□□ -0.13
HDAC4-215ENST00000543185 A0A096LNI7 61 aa14.22□□□□□ -0.13
HDAC4-215ENST00000543185 TMEM254Q8TBM7 123 aa14.22□□□□□ -0.13
HDAC4-215ENST00000543185 CHCHD7Q9BUK0 85 aa14.22□□□□□ -0.13
HDAC4-215ENST00000543185 LINC00959A0A1B0GUT2 108 aa14.21□□□□□ -0.13
HDAC4-215ENST00000543185 PSPHP1O15172 72 aa14.2□□□□□ -0.14
HDAC4-215ENST00000543185 LINC00208Q96KT6 92 aa14.2□□□□□ -0.14
HDAC4-215ENST00000543185 CDC42SE2Q9NRR3 84 aa14.2□□□□□ -0.14
HDAC4-215ENST00000543185 TRAV10A0A0B4J240 114 aa14.19□□□□□ -0.14
HDAC4-215ENST00000543185 EGFEM1PQ0D2K5 195 aa14.18□□□□□ -0.14
HDAC4-215ENST00000543185 A0A1B0GW54 56 aa14.18□□□□□ -0.14
HDAC4-215ENST00000543185 SPINK6Q6UWN8 80 aa14.17□□□□□ -0.14
HDAC4-215ENST00000543185 SOSTDC1Q6X4U4 206 aa14.17□□□□□ -0.14
HDAC4-215ENST00000543185 Q6ZPA2 131 aa14.17□□□□□ -0.14
HDAC4-215ENST00000543185 REG3GQ6UW15 175 aa14.17□□□□□ -0.14
HDAC4-215ENST00000543185 POM121L12Q8N7R1 296 aa14.17□□□□□ -0.14
HDAC4-215ENST00000543185 SERTAD4-AS1Q5TG53 156 aa14.16□□□□□ -0.14
HDAC4-215ENST00000543185 HCG22E2RYF7 251 aa14.15□□□□□ -0.14
HDAC4-215ENST00000543185 BCE1O60756 84 aa14.15□□□□□ -0.14
HDAC4-215ENST00000543185 LRCOL1A6NCL2 159 aa14.15□□□□□ -0.14
HDAC4-215ENST00000543185 LMO4P61968 165 aa14.15□□□□□ -0.14
HDAC4-215ENST00000543185 LINC01547P58512 204 aaPredicted RBP14.15□□□□□ -0.15
HDAC4-215ENST00000543185 H0Y9P7 68 aa14.14□□□□□ -0.15
HDAC4-215ENST00000543185 CRYGAP11844 174 aa14.14□□□□□ -0.15
HDAC4-215ENST00000543185 PSMG3-AS1Q96PY0 264 aa14.13□□□□□ -0.15
HDAC4-215ENST00000543185 KPRPQ5T749 579 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms