RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
COPS7A-216ENST00000543170 MALP21145 153 aa11.88□□□□□ -0.51
COPS7A-216ENST00000543170 UBE2D1P51668 147 aa11.88□□□□□ -0.51
COPS7A-216ENST00000543170 URB1-AS1Q96HZ7 61 aa11.88□□□□□ -0.51
COPS7A-216ENST00000543170 APOMO95445 188 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 LINC00614P0C842 121 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 RAB5BP61020 215 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 FAM19A3Q7Z5A8 133 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 SCGB3A1Q96QR1 104 aa11.87□□□□□ -0.51
COPS7A-216ENST00000543170 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
COPS7A-216ENST00000543170 IGHV3-64A0A075B6Q5 118 aa11.85□□□□□ -0.51
COPS7A-216ENST00000543170 ZNF561-AS1K7EIQ3 104 aa11.85□□□□□ -0.51
COPS7A-216ENST00000543170 Q8N1X5 172 aa11.85□□□□□ -0.51
COPS7A-216ENST00000543170 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
COPS7A-216ENST00000543170 A0A096LNJ9 63 aa11.84□□□□□ -0.51
COPS7A-216ENST00000543170 SEC11AP67812 179 aa11.84□□□□□ -0.51
COPS7A-216ENST00000543170 SDIM1Q6ZPB5 146 aa11.84□□□□□ -0.51
COPS7A-216ENST00000543170 A0A087WZ39 114 aa11.83□□□□□ -0.52
COPS7A-216ENST00000543170 COLCA2A8K830 154 aa11.83□□□□□ -0.52
COPS7A-216ENST00000543170 HBDP02042 147 aa11.83□□□□□ -0.52
COPS7A-216ENST00000543170 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.52
COPS7A-216ENST00000543170 FAT1Q14517 4588 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 TRGC2P03986 189 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
COPS7A-216ENST00000543170 C2orf48Q96LS8 159 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 CARD19Q96LW7 228 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 CHAC1Q9BUX1 264 aa11.82□□□□□ -0.52
COPS7A-216ENST00000543170 HERVK_113P63121 156 aa11.81□□□□□ -0.52
COPS7A-216ENST00000543170 COX6A2Q02221 97 aa11.81□□□□□ -0.52
COPS7A-216ENST00000543170 SPAG11BQ08648 103 aa11.81□□□□□ -0.52
COPS7A-216ENST00000543170 PKIGQ9Y2B9 76 aa11.81□□□□□ -0.52
COPS7A-216ENST00000543170 IGLV4-69A0A075B6H9 119 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 F8WDY8 70 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.8□□□□□ -0.52
COPS7A-216ENST00000543170 HAMPP81172 84 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 SYCNQ0VAF6 134 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 CIRBPQ14011 172 aaKnown RBP11.8□□□□□ -0.52
COPS7A-216ENST00000543170 SCXQ7RTU7 201 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 KRTAP17-1Q9BYP8 105 aa11.8□□□□□ -0.52
COPS7A-216ENST00000543170 PDZD11Q5EBL8 140 aa11.79□□□□□ -0.52
COPS7A-216ENST00000543170 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
COPS7A-216ENST00000543170 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
COPS7A-216ENST00000543170 ABCA13Q86UQ4 5058 aa11.79□□□□□ -0.52
COPS7A-216ENST00000543170 PMVKQ15126 192 aa11.78□□□□□ -0.52
COPS7A-216ENST00000543170 CAMK2N2Q96S95 79 aa11.78□□□□□ -0.52
COPS7A-216ENST00000543170 PMCHL1Q16048 86 aa11.77□□□□□ -0.53
COPS7A-216ENST00000543170 CIRBP-AS1Q8TBR5 109 aa11.77□□□□□ -0.53
COPS7A-216ENST00000543170 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
COPS7A-216ENST00000543170 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
COPS7A-216ENST00000543170 PCLOQ9Y6V0 5065 aa11.76□□□□□ -0.53
COPS7A-216ENST00000543170 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
COPS7A-216ENST00000543170 ATP5LO75964 103 aa11.76□□□□□ -0.53
COPS7A-216ENST00000543170 Q6ZRU5 148 aa11.76□□□□□ -0.53
COPS7A-216ENST00000543170 GEMIN7Q9H840 131 aaKnown RBP11.76□□□□□ -0.53
COPS7A-216ENST00000543170 A0A0J9YXV3 536 aa11.75□□□□□ -0.53
COPS7A-216ENST00000543170 SCO1O75880 301 aa11.75□□□□□ -0.53
COPS7A-216ENST00000543170 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
COPS7A-216ENST00000543170 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 EPM2AB3EWF7 344 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 PANO1I0J062 215 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 RNF151Q2KHN1 245 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 BAGE3Q86Y29 109 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 MRPL35Q9NZE8 188 aaKnown RBP11.74□□□□□ -0.53
COPS7A-216ENST00000543170 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
COPS7A-216ENST00000543170 NDUFA1O15239 70 aa11.73□□□□□ -0.53
COPS7A-216ENST00000543170 KIAA0087Q14695 138 aa11.73□□□□□ -0.53
COPS7A-216ENST00000543170 VPS13BQ7Z7G8 4022 aa11.73□□□□□ -0.53
COPS7A-216ENST00000543170 HSBP1O75506 76 aa11.72□□□□□ -0.53
COPS7A-216ENST00000543170 SMR3BP02814 79 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-216ENST00000543170 Q5VSD8 79 aa11.72□□□□□ -0.53
COPS7A-216ENST00000543170 PACRGQ96M98 296 aaPredicted RBP11.72□□□□□ -0.53
COPS7A-216ENST00000543170 KRTAP4-5Q9BYR2 181 aa11.72□□□□□ -0.53
COPS7A-216ENST00000543170 LINC00474Q9P2X8 69 aa11.72□□□□□ -0.53
COPS7A-216ENST00000543170 FAM229AH3BQW9 127 aa11.71□□□□□ -0.53
COPS7A-216ENST00000543170 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
COPS7A-216ENST00000543170 IGLC3P0DOY3 106 aa11.71□□□□□ -0.53
COPS7A-216ENST00000543170 Q8IZM0 81 aa11.71□□□□□ -0.53
COPS7A-216ENST00000543170 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.53
COPS7A-216ENST00000543170 A0A096LNI7 61 aa11.7□□□□□ -0.54
COPS7A-216ENST00000543170 LOC107984640A0A0U1RRK4 108 aa11.7□□□□□ -0.54
COPS7A-216ENST00000543170 SERF1AO75920 110 aa11.69□□□□□ -0.54
COPS7A-216ENST00000543170 LINC00310P59036 64 aa11.69□□□□□ -0.54
COPS7A-216ENST00000543170 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
COPS7A-216ENST00000543170 IGKV2-24A0A0C4DH68 120 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 SMIM1B2RUZ4 78 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 PRSS2P07478 247 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 PLAC8Q9NZF1 115 aa11.68□□□□□ -0.54
COPS7A-216ENST00000543170 A0A087WYN8 130 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 TRAV12-1A0A0B4J245 112 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 TLX1NBP0CAT3 122 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 S100A1P23297 94 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 PTTG1IPP53801 180 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 NDUFA6P56556 154 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 C6orf48Q9UBA6 75 aa11.67□□□□□ -0.54
COPS7A-216ENST00000543170 H3BRM9 83 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms