RNA–Protein interactions for RNA: ENST00000543103.1

NLRC5-223, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 1,896 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-223	ENST00000543103	NANOS2	P60321	138 aa	Known RBP	11.37	□□□□□ -0.59
NLRC5-223	ENST00000543103		Q8N3U1	123 aa		11.37	□□□□□ -0.59
NLRC5-223	ENST00000543103	C10orf126	Q8N4M7	172 aa		11.37	□□□□□ -0.59
NLRC5-223	ENST00000543103	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.37	□□□□□ -0.59
NLRC5-223	ENST00000543103	SPATA25	Q9BR10	227 aa		11.36	□□□□□ -0.59
NLRC5-223	ENST00000543103	IGLV5-39	A0A0G2JS06	123 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103		A6NDN8	102 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103	SMIM1	B2RUZ4	78 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103	SH2D6	Q7Z4S9	175 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103	C11orf45	Q8TAV5	145 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103	COX11	Q9Y6N1	276 aa		11.35	□□□□□ -0.59
NLRC5-223	ENST00000543103	LINC00959	A0A1B0GUT2	108 aa		11.34	□□□□□ -0.59
NLRC5-223	ENST00000543103		H3BNG1	76 aa		11.34	□□□□□ -0.59
NLRC5-223	ENST00000543103	LELP1	Q5T871	98 aa		11.34	□□□□□ -0.59
NLRC5-223	ENST00000543103	NDUFA12	Q9UI09	145 aa		11.34	□□□□□ -0.59
NLRC5-223	ENST00000543103		A0A0J9YXY3	114 aa		11.33	□□□□□ -0.6
NLRC5-223	ENST00000543103	PTTG1IP	P53801	180 aa		11.33	□□□□□ -0.6
NLRC5-223	ENST00000543103	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
NLRC5-223	ENST00000543103	ZFAND6	Q6FIF0	208 aa		11.33	□□□□□ -0.6
NLRC5-223	ENST00000543103	LYPD5	Q6UWN5	251 aa		11.33	□□□□□ -0.6
NLRC5-223	ENST00000543103	CLPSL2	Q6UWE3	100 aa		11.32	□□□□□ -0.6
NLRC5-223	ENST00000543103	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.32	□□□□□ -0.6
NLRC5-223	ENST00000543103	IGHV3OR16-9	A0A0B4J2B5	98 aa		11.32	□□□□□ -0.6
NLRC5-223	ENST00000543103	DEFB131B	A0A096LNP1	70 aa		11.31	□□□□□ -0.6
NLRC5-223	ENST00000543103	LINC00269	Q8N2A0	174 aa		11.31	□□□□□ -0.6
NLRC5-223	ENST00000543103	NHP2	Q9NX24	153 aa	Known RBP	11.31	□□□□□ -0.6
NLRC5-223	ENST00000543103		K7ERJ3	54 aa		11.3	□□□□□ -0.6
NLRC5-223	ENST00000543103	RAB37	Q96AX2	223 aa		11.3	□□□□□ -0.6
NLRC5-223	ENST00000543103	IGHV3-30	P01768	117 aa		11.29	□□□□□ -0.6
NLRC5-223	ENST00000543103	IGHV3-30-5	P0DP03	117 aa		11.29	□□□□□ -0.6
NLRC5-223	ENST00000543103	LITAF	Q99732	161 aa		11.29	□□□□□ -0.6
NLRC5-223	ENST00000543103	ANG	P03950	147 aa	Known RBP	11.29	□□□□□ -0.6
NLRC5-223	ENST00000543103	COL7A1	Q02388	2944 aa		11.28	□□□□□ -0.6
NLRC5-223	ENST00000543103	NDUFA1	O15239	70 aa		11.28	□□□□□ -0.6
NLRC5-223	ENST00000543103	CCL25	O15444	150 aa		11.28	□□□□□ -0.6
NLRC5-223	ENST00000543103	SMIM13	P0DJ93	91 aa		11.28	□□□□□ -0.6
NLRC5-223	ENST00000543103	DNHD1	Q96M86	4753 aa		11.28	□□□□□ -0.6
NLRC5-223	ENST00000543103	XCL1	P47992	114 aa		11.27	□□□□□ -0.6
NLRC5-223	ENST00000543103	SS18	Q15532	418 aa		11.27	□□□□□ -0.6
NLRC5-223	ENST00000543103	C5orf38	Q86SI9	138 aa		11.27	□□□□□ -0.6
NLRC5-223	ENST00000543103		A0A087WZ39	114 aa		11.27	□□□□□ -0.61
NLRC5-223	ENST00000543103	ADAMTSL4-AS1	Q5T5F5	129 aa		11.27	□□□□□ -0.61
NLRC5-223	ENST00000543103	NAA38	Q9BRA0	125 aa	Known RBP	11.27	□□□□□ -0.61
NLRC5-223	ENST00000543103		Q9H8V8	135 aa		11.27	□□□□□ -0.61
NLRC5-223	ENST00000543103	REG3A	Q06141	175 aa		11.26	□□□□□ -0.61
NLRC5-223	ENST00000543103		A0A1B0GWB2	263 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	C9orf118	A6NHY6	69 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	TMEM238	C9JI98	176 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	KRTAP21-3	Q3LHN1	58 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	ZNF625	Q96I27	306 aa	Predicted RBP	11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	DNAH9	Q9NYC9	4486 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	ESRG	Q1W209	222 aa		11.25	□□□□□ -0.61
NLRC5-223	ENST00000543103	IGLV10-54	A0A075B6I4	117 aa		11.24	□□□□□ -0.61
NLRC5-223	ENST00000543103		H3BUT2	72 aa		11.24	□□□□□ -0.61
NLRC5-223	ENST00000543103	WFDC10B	Q8IUB3	73 aa		11.24	□□□□□ -0.61
NLRC5-223	ENST00000543103	MUSTN1	Q8IVN3	82 aa		11.23	□□□□□ -0.61
NLRC5-223	ENST00000543103	COX7B2	Q8TF08	81 aa		11.23	□□□□□ -0.61
NLRC5-223	ENST00000543103	TOMM7	Q9P0U1	55 aa		11.23	□□□□□ -0.61
NLRC5-223	ENST00000543103	KLK12	Q9UKR0	248 aa		11.23	□□□□□ -0.61
NLRC5-223	ENST00000543103	TRAV10	A0A0B4J240	114 aa		11.22	□□□□□ -0.61
NLRC5-223	ENST00000543103	IGHV3-33	P01772	117 aa		11.22	□□□□□ -0.61
NLRC5-223	ENST00000543103	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.22	□□□□□ -0.61
NLRC5-223	ENST00000543103	TMEM238L	A0A1B0GVL6	79 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103		A6NJY4	79 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103	VAMP3	Q15836	100 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103	SPANXD	Q9BXN6	97 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103	PRR34	Q9NV39	138 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103	SPANXC	Q9NY87	97 aa		11.21	□□□□□ -0.61
NLRC5-223	ENST00000543103	TIMM17B	O60830	172 aa		11.21	□□□□□ -0.62
NLRC5-223	ENST00000543103	CD164L2	Q6UWJ8	174 aa		11.21	□□□□□ -0.62
NLRC5-223	ENST00000543103	DAND5	Q8N907	189 aa		11.21	□□□□□ -0.62
NLRC5-223	ENST00000543103		A4D1N5	150 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	PRSS2	P07478	247 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	CFC1B	P0CG36	223 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	CFC1	P0CG37	223 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	MIA	Q16674	131 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	ENHO	Q6UWT2	76 aa		11.2	□□□□□ -0.62
NLRC5-223	ENST00000543103	EIF4EBP3	O60516	100 aa	Predicted RBP	11.19	□□□□□ -0.62
NLRC5-223	ENST00000543103	APOM	O95445	188 aa		11.19	□□□□□ -0.62
NLRC5-223	ENST00000543103		A0A0U1RRA0	63 aa		11.19	□□□□□ -0.62
NLRC5-223	ENST00000543103	IGLL5	B9A064	214 aa		11.19	□□□□□ -0.62
NLRC5-223	ENST00000543103	NPC2	P61916	151 aa		11.19	□□□□□ -0.62
NLRC5-223	ENST00000543103	HERV-K104	P63124	156 aa		11.18	□□□□□ -0.62
NLRC5-223	ENST00000543103	FOXI1	Q12951	378 aa		11.18	□□□□□ -0.62
NLRC5-223	ENST00000543103		A0A1W2PPM0	123 aa		11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	RPL24	P83731	157 aa	Known RBP	11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	UBE2V1	Q13404	147 aa		11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	B9D2	Q9BPU9	175 aa		11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	STAB2	Q8WWQ8	2551 aa		11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	CIRBP	Q14011	172 aa	Known RBP	11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	LINC01561	Q8N1V8	128 aa		11.17	□□□□□ -0.62
NLRC5-223	ENST00000543103	COX7A2L	O14548	114 aa		11.16	□□□□□ -0.62
NLRC5-223	ENST00000543103	MEIG1	Q5JSS6	88 aa		11.16	□□□□□ -0.62
NLRC5-223	ENST00000543103	UBE2W	Q96B02	151 aa		11.15	□□□□□ -0.62
NLRC5-223	ENST00000543103	GAGE12H	A6NDE8	117 aa		11.15	□□□□□ -0.63
NLRC5-223	ENST00000543103	C15orf53	Q8NAA6	179 aa		11.15	□□□□□ -0.63
NLRC5-223	ENST00000543103	PGPEP1	Q9NXJ5	209 aa		11.15	□□□□□ -0.63
NLRC5-223	ENST00000543103	C6orf226	Q5I0X4	101 aa		11.14	□□□□□ -0.63
NLRC5-223	ENST00000543103		Q8IZM0	81 aa		11.14	□□□□□ -0.63
NLRC5-223	ENST00000543103	KIAA0087	Q14695	138 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms