RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.89□□□□□ -1.63
NECAP1-205ENST00000541948 SMIM27A0A1W2PRY6 76 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 LINC00862A6NCI5 91 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 I3L3M4 83 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 CNBPP62633 177 aaKnown RBP4.89□□□□□ -1.63
NECAP1-205ENST00000541948 FOXI1Q12951 378 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 CIRBPQ14011 172 aaKnown RBP4.89□□□□□ -1.63
NECAP1-205ENST00000541948 TMEM241Q24JQ0 296 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
NECAP1-205ENST00000541948 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
NECAP1-205ENST00000541948 TRBV27A0A0K0K1C4 114 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 UBE2L6O14933 153 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 APCSP02743 223 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 ADIRFQ15847 76 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
NECAP1-205ENST00000541948 HIGD2BQ4VC39 106 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 CHCHD10Q8WYQ3 142 aaPredicted RBP4.88□□□□□ -1.63
NECAP1-205ENST00000541948 LINC00526Q96FQ7 95 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 NAT8Q9UHE5 227 aa4.88□□□□□ -1.63
NECAP1-205ENST00000541948 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 A0A1B0GXF2 115 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 hDV102S1A0JD36 115 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 RPL37AP61513 92 aaKnown RBP4.87□□□□□ -1.63
NECAP1-205ENST00000541948 RPL32P62910 135 aaKnown RBP4.87□□□□□ -1.63
NECAP1-205ENST00000541948 FAM74A3Q4VXF1 159 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 UQCC3Q6UW78 93 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 Q6ZRU5 148 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 ST20Q9HBF5 79 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 CDC42SE2Q9NRR3 84 aa4.87□□□□□ -1.63
NECAP1-205ENST00000541948 SPANXB1Q9NS25 103 aaPredicted RBP4.87□□□□□ -1.63
NECAP1-205ENST00000541948 LINC00959A0A1B0GUT2 108 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 H7C423 109 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 RNASE13Q5GAN3 156 aaKnown RBP4.86□□□□□ -1.63
NECAP1-205ENST00000541948 FAM104BQ5XKR9 115 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 PRSS3P2Q8NHM4 247 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 MRAP2Q96G30 205 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 NAT8BQ9UHF3 227 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
NECAP1-205ENST00000541948 A0A087WYN8 130 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 GVQW2A0A096LPI5 108 aaPredicted RBP4.85□□□□□ -1.63
NECAP1-205ENST00000541948 CCL25O15444 150 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 NPYP01303 97 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 DDTP30046 118 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 XCL1P47992 114 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
NECAP1-205ENST00000541948 COX6A2Q02221 97 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 RIGQ13278 110 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 AMMECR1LQ6DCA0 310 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 MRPL54Q6P161 138 aaKnown RBP4.85□□□□□ -1.63
NECAP1-205ENST00000541948 SPACA4Q8TDM5 124 aa4.85□□□□□ -1.63
NECAP1-205ENST00000541948 OPRPNQ99935 248 aaPredicted RBP4.85□□□□□ -1.63
NECAP1-205ENST00000541948 FAT3Q8TDW7 4589 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 TRBV24-1A0A075B6N3 115 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 IGHV3-64A0A075B6Q5 118 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 A0A096LNI7 61 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.63
NECAP1-205ENST00000541948 PEA15Q15121 130 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 Q6ZUT4 128 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 ZNF664Q8N3J9 261 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 BORCS7Q96B45 105 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 PLA2G2DQ9UNK4 145 aa4.84□□□□□ -1.63
NECAP1-205ENST00000541948 C7orf77A4D0Y5 90 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 D6R8Y8 96 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 K7ERU9 68 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 VCYO14598 125 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 NPSP0C0P6 89 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 ADCYAP1P18509 176 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 C7orf33Q8WU49 177 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 SMDT1Q9H4I9 107 aa4.83□□□□□ -1.64
NECAP1-205ENST00000541948 PLAC8Q9NZF1 115 aa4.82□□□□□ -1.64
NECAP1-205ENST00000541948 IGKV2-24A0A0C4DH68 120 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 PTTG1IPP53801 180 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 CKS1BP61024 79 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 HBBP68871 147 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 SMAGPQ0VAQ4 97 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 DPH3Q96FX2 82 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 BTF3L4Q96K17 158 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 C20orf78Q9BR46 151 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 SMIM2Q9BVW6 85 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
NECAP1-205ENST00000541948 IGLV4-69A0A075B6H9 119 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 IGHV1-58A0A0C4DH39 117 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 M0R143 59 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 PHOX2AO14813 284 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 FCER1GP30273 86 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 CKS2P33552 79 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 ZC2HC1BQ5TFG8 222 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 C5orf38Q86SI9 138 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 TMEM101Q96IK0 257 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 TIMM21Q9BVV7 248 aa4.8□□□□□ -1.64
NECAP1-205ENST00000541948 TGIF2-C20orf24A0A0A6YYL0 155 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 TRAV13-1A0A0B4J241 112 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 C20orf202A1L168 122 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 SS18Q15532 418 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 CLLU1Q5K131 121 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 COMMD7Q86VX2 200 aa4.79□□□□□ -1.64
NECAP1-205ENST00000541948 SMIM20Q8N5G0 67 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms