RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 NDUFA1O15239 70 aa12.2□□□□□ -0.46
SPIDR-227ENST00000541342 TIMM17BO60830 172 aa12.2□□□□□ -0.46
SPIDR-227ENST00000541342 C2orf82Q6UX34 121 aa12.2□□□□□ -0.46
SPIDR-227ENST00000541342 UBE2WQ96B02 151 aa12.2□□□□□ -0.46
SPIDR-227ENST00000541342 LST1O00453 97 aa12.19□□□□□ -0.46
SPIDR-227ENST00000541342 RS1O15537 224 aa12.19□□□□□ -0.46
SPIDR-227ENST00000541342 DNAJC30Q96LL9 226 aa12.19□□□□□ -0.46
SPIDR-227ENST00000541342 ANAPC13Q9BS18 74 aa12.19□□□□□ -0.46
SPIDR-227ENST00000541342 TIRAPP58753 221 aa12.18□□□□□ -0.46
SPIDR-227ENST00000541342 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
SPIDR-227ENST00000541342 IGLV5-39A0A0G2JS06 123 aa12.17□□□□□ -0.46
SPIDR-227ENST00000541342 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
SPIDR-227ENST00000541342 TRAV8-4A0A0B4J246 113 aa12.17□□□□□ -0.46
SPIDR-227ENST00000541342 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
SPIDR-227ENST00000541342 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
SPIDR-227ENST00000541342 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
SPIDR-227ENST00000541342 H3BT86 120 aa12.16□□□□□ -0.46
SPIDR-227ENST00000541342 SNCGO76070 127 aa12.16□□□□□ -0.46
SPIDR-227ENST00000541342 IFITM1P13164 125 aa12.16□□□□□ -0.46
SPIDR-227ENST00000541342 Q6ZTI0 123 aa12.16□□□□□ -0.46
SPIDR-227ENST00000541342 COX6CP09669 75 aa12.15□□□□□ -0.46
SPIDR-227ENST00000541342 LINC00308Q8TCZ7 52 aa12.15□□□□□ -0.46
SPIDR-227ENST00000541342 Q9H8V8 135 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 FBN1P35555 2871 aaKnown RBP12.14□□□□□ -0.47
SPIDR-227ENST00000541342 CYSRT1A8MQ03 144 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 GAGE2EQ4V326 116 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 NOP10Q9NPE3 64 aaKnown RBP12.14□□□□□ -0.47
SPIDR-227ENST00000541342 GAGE2DQ9UEU5 116 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 CMYA5Q8N3K9 4069 aa12.14□□□□□ -0.47
SPIDR-227ENST00000541342 ZNF625Q96I27 306 aaPredicted RBP12.14□□□□□ -0.47
SPIDR-227ENST00000541342 NDUFV3P56181 108 aaKnown RBP12.13□□□□□ -0.47
SPIDR-227ENST00000541342 C15orf53Q8NAA6 179 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 SMIM1B2RUZ4 78 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 DEFB121Q5J5C9 76 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 C16orf74Q96GX8 76 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 BAHCC1Q9P281 2608 aa12.13□□□□□ -0.47
SPIDR-227ENST00000541342 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
SPIDR-227ENST00000541342 A0A0U1RRA0 63 aa12.12□□□□□ -0.47
SPIDR-227ENST00000541342 FAM19A3Q7Z5A8 133 aa12.12□□□□□ -0.47
SPIDR-227ENST00000541342 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
SPIDR-227ENST00000541342 HERVK_113P63121 156 aa12.11□□□□□ -0.47
SPIDR-227ENST00000541342 Q6Q795 121 aa12.1□□□□□ -0.47
SPIDR-227ENST00000541342 F5H768 121 aa12.09□□□□□ -0.47
SPIDR-227ENST00000541342 KRTAP24-1Q3LI83 254 aa12.09□□□□□ -0.47
SPIDR-227ENST00000541342 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
SPIDR-227ENST00000541342 WFDC9Q8NEX5 89 aa12.09□□□□□ -0.47
SPIDR-227ENST00000541342 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
SPIDR-227ENST00000541342 TRAV13-1A0A0B4J241 112 aa12.08□□□□□ -0.48
SPIDR-227ENST00000541342 CIRBPQ14011 172 aaKnown RBP12.08□□□□□ -0.48
SPIDR-227ENST00000541342 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.48
SPIDR-227ENST00000541342 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
SPIDR-227ENST00000541342 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
SPIDR-227ENST00000541342 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE7O76087 117 aa12.07□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE12FP0CL80 117 aa12.07□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE12GP0CL81 117 aa12.07□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE12IP0CL82 117 aa12.07□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE5Q13069 117 aa12.06□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE6Q13070 117 aa12.06□□□□□ -0.48
SPIDR-227ENST00000541342 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
SPIDR-227ENST00000541342 K7EQD1 137 aa12.06□□□□□ -0.48
SPIDR-227ENST00000541342 COX7A2LO14548 114 aa12.06□□□□□ -0.48
SPIDR-227ENST00000541342 CCDC179H3BU77 68 aa12.05□□□□□ -0.48
SPIDR-227ENST00000541342 B5MCH6 92 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 SS18L2Q9UHA2 77 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 PRIMA1Q86XR5 153 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 X6R8D5 127 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 TRGV2A0A075B6R0 118 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 WIPF1O43516 503 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 C22orf24Q9Y442 160 aa12.04□□□□□ -0.48
SPIDR-227ENST00000541342 RPL36AP83881 106 aaKnown RBP12.03□□□□□ -0.48
SPIDR-227ENST00000541342 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
SPIDR-227ENST00000541342 RPL36ALQ969Q0 106 aaKnown RBP12.03□□□□□ -0.48
SPIDR-227ENST00000541342 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
SPIDR-227ENST00000541342 ANK2Q01484 3957 aa12.03□□□□□ -0.48
SPIDR-227ENST00000541342 TRBV10-1A0A0K0K1A3 114 aa12.03□□□□□ -0.48
SPIDR-227ENST00000541342 MRPL23Q16540 153 aaKnown RBP12.03□□□□□ -0.48
SPIDR-227ENST00000541342 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
SPIDR-227ENST00000541342 GAGE4Q13068 117 aa12.02□□□□□ -0.49
SPIDR-227ENST00000541342 FAM218AQ96MZ4 157 aa12.02□□□□□ -0.49
SPIDR-227ENST00000541342 PKD1L1Q8TDX9 2849 aa12.01□□□□□ -0.49
SPIDR-227ENST00000541342 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
SPIDR-227ENST00000541342 STAB1Q9NY15 2570 aa12□□□□□ -0.49
SPIDR-227ENST00000541342 DEFB135Q30KP9 77 aa11.99□□□□□ -0.49
SPIDR-227ENST00000541342 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
SPIDR-227ENST00000541342 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
SPIDR-227ENST00000541342 LOC100131303A0A0U1RQF7 123 aa11.99□□□□□ -0.49
SPIDR-227ENST00000541342 KIR2DL5BQ8NHK3 375 aa11.98□□□□□ -0.49
SPIDR-227ENST00000541342 FHL2Q14192 279 aa11.98□□□□□ -0.49
SPIDR-227ENST00000541342 LINC00612Q8N6U2 182 aa11.98□□□□□ -0.49
SPIDR-227ENST00000541342 HERV-K104P63124 156 aa11.97□□□□□ -0.49
SPIDR-227ENST00000541342 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
SPIDR-227ENST00000541342 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
SPIDR-227ENST00000541342 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
SPIDR-227ENST00000541342 TRBV6-4A0A1B0GX49 114 aa11.96□□□□□ -0.49
SPIDR-227ENST00000541342 SMIM9A6NGZ8 99 aa11.96□□□□□ -0.49
SPIDR-227ENST00000541342 TRACP01848 142 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms