RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IGHV4-30-4	P0DP06	118 aa		4.1	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	RHOH	Q15669	191 aa		4.1	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	FAM104A	Q969W3	186 aa		4.1	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	IGHV1OR15-1	A0A075B7D0	117 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	FAM236A	A0A1B0GUQ0	79 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	FAM236B	A0A1B0GV22	79 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783		M0QXV9	152 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783		Q6Q795	121 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	C9orf85	Q96MD7	179 aa		4.09	□□□□□ -1.75
RAPGEF4-215	ENST00000540783	IGHV1-58	A0A0C4DH39	117 aa		4.09	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DEFB135	Q30KP9	77 aa		4.09	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DCANP1	Q8TF63	244 aa		4.09	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	PPDPF	Q9H3Y8	114 aa		4.09	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LST1	O00453	97 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RS1	O15537	224 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	MIA	Q16674	131 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	BEAN1	Q3B7T3	259 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783		Q6ZSN1	163 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TRGV1	A0A0A0MS02	117 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	C4orf48	Q5BLP8	95 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	VSIG2	Q96IQ7	327 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TNFRSF18	Q9Y5U5	241 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783		H3BT86	120 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CDKN2A-AS1	Q9UH64	79 aa		4.08	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CRYBG3	Q68DQ2	2970 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	MRPS36	P82909	103 aa	Known RBP	4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	SMCR5	Q8TEV8	140 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LYRM9	A8MSI8	78 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	ATP5G1	P05496	136 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	B9D2	Q9BPU9	175 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	UTP20	O75691	2785 aa	Known RBP	4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	NIPBL	Q6KC79	2804 aa	eCLIP	4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783		F5H768	121 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RBMY1A1	P0DJD3	496 aa	Known RBP	4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RBMY1C	P0DJD4	496 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RBMY1F	Q15415	496 aa	Known RBP	4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	C11orf45	Q8TAV5	145 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LINC00467	Q9BRT7	94 aa		4.07	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LOC107984640	A0A0U1RRK4	108 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DEFB130B	P0DP73	79 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DEFB130A	P0DP74	79 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	KRTAP10-3	P60369	221 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	COX6A2	Q02221	97 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TMEM101	Q96IK0	257 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	SPANXD	Q9BXN6	97 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	SPANXC	Q9NY87	97 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LINC00694	P0DN24	101 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	ODF3L2	Q3SX64	289 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	HIST2H2BD	Q6DRA6	164 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783		Q9H8V8	135 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	EGFEM1P	Q0D2K5	195 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	MRPL23	Q16540	153 aa	Known RBP	4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	C9orf153	Q5TBE3	101 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783		Q9HAA7	133 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	FBN2	P35556	2912 aa		4.06	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DAZ2	Q13117	558 aa	Known RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DGAT2L7P	Q6IED9	249 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DAZ4	Q86SG3	579 aa	Known RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	DAZ3	Q9NR90	486 aa	Known RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TRAV10	A0A0B4J240	114 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	NUPR2	A6NF83	97 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	WIPF1	O43516	503 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	PRB2	P02812	416 aa	Predicted RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RPL36A	P83881	106 aa	Known RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LINC00308	Q8TCZ7	52 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	RPL36AL	Q969Q0	106 aa	Known RBP	4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CHCHD7	Q9BUK0	85 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	UBE2D4	Q9Y2X8	147 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TRAV13-1	A0A0B4J241	112 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TINCR	A0A1B0GVN0	87 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	BAALC-AS2	P0C853	105 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	GAGE2A	Q6NT46	116 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	SOSTDC1	Q6X4U4	206 aa		4.05	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TRBV7-7	A0A0K0K1E9	115 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	PIK3CD-AS1	Q5SR53	167 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	LINC01600	Q96MT4	127 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	PYGO1	Q9Y3Y4	419 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CCL18	P55774	89 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	FAM218A	Q96MZ4	157 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	FAM240A	A0A1B0GVK7	77 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	UBE2L6	O14933	153 aa		4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CIRBP	Q14011	172 aa	Known RBP	4.04	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	CELSR2	Q9HCU4	2923 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	COX7A2L	O14548	114 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	TIRAP	P58753	221 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	EDA2R	Q9HAV5	297 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	PAX4	O43316	350 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	HERVK_113	P63121	156 aa		4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	NOP10	Q9NPE3	64 aa	Known RBP	4.03	□□□□□ -1.76
RAPGEF4-215	ENST00000540783	IGHV3-53	P01767	116 aa		4.03	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	C3orf22	Q8N5N4	141 aa		4.03	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	WWC2-AS2	Q96NR7	200 aa		4.03	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	ZAN	Q9Y493	2812 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	IGKV3OR2-268	A0A0C4DH90	116 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	NDUFA1	O15239	70 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	SDIM1	Q6ZPB5	146 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	LINC00643	Q86TS7	51 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	RMI2	Q96E14	147 aa		4.02	□□□□□ -1.77
RAPGEF4-215	ENST00000540783	TMEM126A	Q9H061	195 aa		4.02	□□□□□ -1.77

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