RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 ESM1Q9NQ30 184 aa9.37□□□□□ -0.91
MSH6-210ENST00000540021 TRACP01848 142 aa9.37□□□□□ -0.91
MSH6-210ENST00000540021 Q6Q795 121 aa9.37□□□□□ -0.91
MSH6-210ENST00000540021 hADV29S1A0JD25 119 aa9.37□□□□□ -0.91
MSH6-210ENST00000540021 TMEM89A2RUT3 159 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 LITAFQ99732 161 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 Q96MF0 132 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
MSH6-210ENST00000540021 HRNRQ86YZ3 2850 aaPredicted RBP9.35□□□□□ -0.91
MSH6-210ENST00000540021 SS18Q15532 418 aa9.35□□□□□ -0.91
MSH6-210ENST00000540021 CITED2Q99967 270 aaPredicted RBP9.35□□□□□ -0.91
MSH6-210ENST00000540021 TIMM17BO60830 172 aa9.35□□□□□ -0.91
MSH6-210ENST00000540021 PF4P02776 101 aa9.35□□□□□ -0.91
MSH6-210ENST00000540021 HAMPP81172 84 aa9.35□□□□□ -0.91
MSH6-210ENST00000540021 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
MSH6-210ENST00000540021 CCL24O00175 119 aa9.34□□□□□ -0.91
MSH6-210ENST00000540021 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
MSH6-210ENST00000540021 ORMDL1Q9P0S3 153 aa9.34□□□□□ -0.91
MSH6-210ENST00000540021 PRB1P04280 392 aa9.34□□□□□ -0.91
MSH6-210ENST00000540021 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.34□□□□□ -0.91
MSH6-210ENST00000540021 A0A087WVE0 104 aa9.33□□□□□ -0.92
MSH6-210ENST00000540021 ITPR1Q14643 2758 aa9.33□□□□□ -0.92
MSH6-210ENST00000540021 ATOX1O00244 68 aa9.33□□□□□ -0.92
MSH6-210ENST00000540021 UQCRQO14949 82 aa9.33□□□□□ -0.92
MSH6-210ENST00000540021 ZNF702PQ9H963 129 aa9.33□□□□□ -0.92
MSH6-210ENST00000540021 FAM240AA0A1B0GVK7 77 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 RNF152Q8N8N0 203 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 CELSR1Q9NYQ6 3014 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 H0YGX0 51 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 J3QLI3 93 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 KLK9Q2XQG4 91 aa9.32□□□□□ -0.92
MSH6-210ENST00000540021 M0QXV9 152 aa9.31□□□□□ -0.92
MSH6-210ENST00000540021 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
MSH6-210ENST00000540021 TRAV23DV6A0A075B6W5 121 aa9.31□□□□□ -0.92
MSH6-210ENST00000540021 ANGP03950 147 aaKnown RBP9.31□□□□□ -0.92
MSH6-210ENST00000540021 A0A087WYN8 130 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 TRBV10-1A0A0K0K1A3 114 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 PLA2G2AP14555 144 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 GYPEP15421 78 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 WFDC9Q8NEX5 89 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 CHD6Q8TD26 2715 aa9.3□□□□□ -0.92
MSH6-210ENST00000540021 DEFB4AO15263 64 aa9.29□□□□□ -0.92
MSH6-210ENST00000540021 FLNCQ14315 2725 aa9.29□□□□□ -0.92
MSH6-210ENST00000540021 PPDPFQ9H3Y8 114 aa9.29□□□□□ -0.92
MSH6-210ENST00000540021 CCL18P55774 89 aa9.28□□□□□ -0.92
MSH6-210ENST00000540021 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
MSH6-210ENST00000540021 Q6YL49 198 aa9.28□□□□□ -0.92
MSH6-210ENST00000540021 J3KT08 172 aa9.28□□□□□ -0.92
MSH6-210ENST00000540021 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
MSH6-210ENST00000540021 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.92
MSH6-210ENST00000540021 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.92
MSH6-210ENST00000540021 ZANQ9Y493 2812 aa9.27□□□□□ -0.93
MSH6-210ENST00000540021 BRI3O95415 125 aa9.27□□□□□ -0.93
MSH6-210ENST00000540021 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
MSH6-210ENST00000540021 WFDC11Q8NEX6 87 aa9.27□□□□□ -0.93
MSH6-210ENST00000540021 IMUPQ9GZP8 106 aa9.27□□□□□ -0.93
MSH6-210ENST00000540021 IGLV4-60A0A075B6I1 120 aa9.26□□□□□ -0.93
MSH6-210ENST00000540021 CUBNO60494 3623 aa9.26□□□□□ -0.93
MSH6-210ENST00000540021 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
MSH6-210ENST00000540021 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
MSH6-210ENST00000540021 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
MSH6-210ENST00000540021 COX7CP15954 63 aa9.25□□□□□ -0.93
MSH6-210ENST00000540021 CXCL5P42830 114 aa9.25□□□□□ -0.93
MSH6-210ENST00000540021 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
MSH6-210ENST00000540021 TRBV7-7A0A0K0K1E9 115 aa9.24□□□□□ -0.93
MSH6-210ENST00000540021 ZFHX3Q15911 3703 aa9.24□□□□□ -0.93
MSH6-210ENST00000540021 GHRHP01286 108 aa9.24□□□□□ -0.93
MSH6-210ENST00000540021 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
MSH6-210ENST00000540021 LINC00526Q96FQ7 95 aa9.24□□□□□ -0.93
MSH6-210ENST00000540021 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 IGLV5-39A0A0G2JS06 123 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 IGHV4-31P0DP07 118 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 C20orf197Q8N268 126 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 LINC00846Q9NV44 126 aa9.23□□□□□ -0.93
MSH6-210ENST00000540021 F5H768 121 aa9.22□□□□□ -0.93
MSH6-210ENST00000540021 RPL18AQ02543 176 aaKnown RBP9.22□□□□□ -0.93
MSH6-210ENST00000540021 LRRC75A-AS1Q8N1F1 130 aa9.22□□□□□ -0.93
MSH6-210ENST00000540021 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
MSH6-210ENST00000540021 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
MSH6-210ENST00000540021 LINC00269Q8N2A0 174 aa9.22□□□□□ -0.93
MSH6-210ENST00000540021 IBA57-AS1B1ANH7 110 aa9.21□□□□□ -0.93
MSH6-210ENST00000540021 CRYBG3Q68DQ2 2970 aa9.21□□□□□ -0.93
MSH6-210ENST00000540021 CMC4P56277 68 aaPredicted RBP9.21□□□□□ -0.94
MSH6-210ENST00000540021 BEAN1Q3B7T3 259 aa9.21□□□□□ -0.94
MSH6-210ENST00000540021 NBEAL2Q6ZNJ1 2754 aa9.2□□□□□ -0.94
MSH6-210ENST00000540021 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
MSH6-210ENST00000540021 C9orf116Q5BN46 136 aaPredicted RBP9.19□□□□□ -0.94
MSH6-210ENST00000540021 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
MSH6-210ENST00000540021 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms