RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 TIMM17AQ99595 171 aa8.67□□□□□ -1.02
PRPF19-204ENST00000539960 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
PRPF19-204ENST00000539960 LINC00242Q5T6M2 205 aa8.66□□□□□ -1.02
PRPF19-204ENST00000539960 ZC2HC1BQ5TFG8 222 aa8.66□□□□□ -1.02
PRPF19-204ENST00000539960 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
PRPF19-204ENST00000539960 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
PRPF19-204ENST00000539960 APOBP04114 4563 aaKnown RBP8.65□□□□□ -1.02
PRPF19-204ENST00000539960 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 APOMO95445 188 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 UBE2D1P51668 147 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 RAB5BP61020 215 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 COX6A2Q02221 97 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 Q8N1X5 172 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 LINC00526Q96FQ7 95 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 URB1-AS1Q96HZ7 61 aa8.65□□□□□ -1.02
PRPF19-204ENST00000539960 HSPG2P98160 4391 aa8.64□□□□□ -1.03
PRPF19-204ENST00000539960 IGHV3-64A0A075B6Q5 118 aa8.64□□□□□ -1.03
PRPF19-204ENST00000539960 COLCA2A8K830 154 aa8.64□□□□□ -1.03
PRPF19-204ENST00000539960 HAMPP81172 84 aa8.64□□□□□ -1.03
PRPF19-204ENST00000539960 CHAC1Q9BUX1 264 aa8.64□□□□□ -1.03
PRPF19-204ENST00000539960 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
PRPF19-204ENST00000539960 A0A087WZ39 114 aa8.62□□□□□ -1.03
PRPF19-204ENST00000539960 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
PRPF19-204ENST00000539960 TRGC2P03986 189 aa8.62□□□□□ -1.03
PRPF19-204ENST00000539960 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
PRPF19-204ENST00000539960 KRTAP4-5Q9BYR2 181 aa8.62□□□□□ -1.03
PRPF19-204ENST00000539960 A0A096LNJ9 63 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 SEC11AP67812 179 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 CST9LQ9H4G1 147 aa8.61□□□□□ -1.03
PRPF19-204ENST00000539960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.6□□□□□ -1.03
PRPF19-204ENST00000539960 HBDP02042 147 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
PRPF19-204ENST00000539960 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
PRPF19-204ENST00000539960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
PRPF19-204ENST00000539960 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
PRPF19-204ENST00000539960 PANO1I0J062 215 aa8.59□□□□□ -1.03
PRPF19-204ENST00000539960 SPAG11BQ08648 103 aa8.59□□□□□ -1.03
PRPF19-204ENST00000539960 PMVKQ15126 192 aa8.59□□□□□ -1.03
PRPF19-204ENST00000539960 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
PRPF19-204ENST00000539960 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
PRPF19-204ENST00000539960 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 F8WDY8 70 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 SCO1O75880 301 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 HERVK_113P63121 156 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 PDZD11Q5EBL8 140 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 Q6ZRU5 148 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 DPH3Q96FX2 82 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
PRPF19-204ENST00000539960 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
PRPF19-204ENST00000539960 ATP5LO75964 103 aa8.57□□□□□ -1.04
PRPF19-204ENST00000539960 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
PRPF19-204ENST00000539960 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
PRPF19-204ENST00000539960 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
PRPF19-204ENST00000539960 CDKN2A-AS1Q9UH64 79 aa8.57□□□□□ -1.04
PRPF19-204ENST00000539960 TINCRA0A1B0GVN0 87 aa8.56□□□□□ -1.04
PRPF19-204ENST00000539960 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
PRPF19-204ENST00000539960 NDUFA6P56556 154 aa8.56□□□□□ -1.04
PRPF19-204ENST00000539960 PKIGQ9Y2B9 76 aa8.56□□□□□ -1.04
PRPF19-204ENST00000539960 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
PRPF19-204ENST00000539960 Q5VSD8 79 aa8.55□□□□□ -1.04
PRPF19-204ENST00000539960 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
PRPF19-204ENST00000539960 NDUFA1O15239 70 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 HSBP1O75506 76 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 C10orf25Q5T742 122 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
PRPF19-204ENST00000539960 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
PRPF19-204ENST00000539960 IGLV5-45A0A087WSX0 123 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 A0A087WYN8 130 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 A0A096LNI7 61 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 LOC107984640A0A0U1RRK4 108 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 FAM19A2Q8N3H0 131 aa8.53□□□□□ -1.04
PRPF19-204ENST00000539960 SERF1AO75920 110 aa8.52□□□□□ -1.05
PRPF19-204ENST00000539960 PRSS2P07478 247 aa8.52□□□□□ -1.05
PRPF19-204ENST00000539960 C6orf226Q5I0X4 101 aa8.52□□□□□ -1.05
PRPF19-204ENST00000539960 PACRGQ96M98 296 aaPredicted RBP8.52□□□□□ -1.05
PRPF19-204ENST00000539960 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
PRPF19-204ENST00000539960 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
PRPF19-204ENST00000539960 IGLC3P0DOY3 106 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 LINC00310P59036 64 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 IFI27L1Q96BM0 104 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
PRPF19-204ENST00000539960 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 NUPR1O60356 82 aa8.5□□□□□ -1.05
PRPF19-204ENST00000539960 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms