RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 XCL1P47992 114 aa10.9□□□□□ -0.66
TRAF3-204ENST00000539721 CASC10Q5T4H9 136 aa10.9□□□□□ -0.66
TRAF3-204ENST00000539721 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
TRAF3-204ENST00000539721 HERVK_113P61574 105 aa10.9□□□□□ -0.67
TRAF3-204ENST00000539721 MIAQ16674 131 aa10.9□□□□□ -0.67
TRAF3-204ENST00000539721 ANKRD39Q53RE8 183 aa10.9□□□□□ -0.67
TRAF3-204ENST00000539721 C10orf126Q8N4M7 172 aa10.9□□□□□ -0.67
TRAF3-204ENST00000539721 CHCHD10Q8WYQ3 142 aaPredicted RBP10.9□□□□□ -0.67
TRAF3-204ENST00000539721 H3BRM9 83 aa10.89□□□□□ -0.67
TRAF3-204ENST00000539721 LYSTQ99698 3801 aa10.89□□□□□ -0.67
TRAF3-204ENST00000539721 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
TRAF3-204ENST00000539721 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
TRAF3-204ENST00000539721 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
TRAF3-204ENST00000539721 IBA57-AS1B1ANH7 110 aa10.88□□□□□ -0.67
TRAF3-204ENST00000539721 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
TRAF3-204ENST00000539721 K7EP13 123 aa10.87□□□□□ -0.67
TRAF3-204ENST00000539721 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
TRAF3-204ENST00000539721 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
TRAF3-204ENST00000539721 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
TRAF3-204ENST00000539721 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
TRAF3-204ENST00000539721 Q9HAA7 133 aa10.86□□□□□ -0.67
TRAF3-204ENST00000539721 TRAV8-3A0A0A6YYJ7 113 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 GAGE12HA6NDE8 117 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 E9PLD3 99 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 NMUP48645 174 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 IGKV2D-26A0A0A0MRZ7 120 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 C1orf43Q9BWL3 253 aa10.85□□□□□ -0.67
TRAF3-204ENST00000539721 A0A087WZ39 114 aa10.84□□□□□ -0.67
TRAF3-204ENST00000539721 FOXI1Q12951 378 aa10.84□□□□□ -0.67
TRAF3-204ENST00000539721 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
TRAF3-204ENST00000539721 IGKV2D-24A0A075B6R9 120 aa10.83□□□□□ -0.68
TRAF3-204ENST00000539721 SMIM1B2RUZ4 78 aa10.83□□□□□ -0.68
TRAF3-204ENST00000539721 COX7A2LO14548 114 aa10.83□□□□□ -0.68
TRAF3-204ENST00000539721 KRTAP1-5Q9BYS1 174 aa10.83□□□□□ -0.68
TRAF3-204ENST00000539721 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
TRAF3-204ENST00000539721 LEPROTO15243 131 aa10.82□□□□□ -0.68
TRAF3-204ENST00000539721 TTC32Q5I0X7 151 aa10.82□□□□□ -0.68
TRAF3-204ENST00000539721 C14orf144Q96I85 54 aa10.82□□□□□ -0.68
TRAF3-204ENST00000539721 RMI2Q96E14 147 aa10.82□□□□□ -0.68
TRAF3-204ENST00000539721 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
TRAF3-204ENST00000539721 MALP21145 153 aa10.81□□□□□ -0.68
TRAF3-204ENST00000539721 PLEKHB2Q96CS7 222 aa10.81□□□□□ -0.68
TRAF3-204ENST00000539721 IGLV5-39A0A0G2JS06 123 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 LY6G6CO95867 125 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 KRTAP26-1Q6PEX3 210 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 DNAH1Q9P2D7 4330 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 TSTD3H0UI37 97 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 J3QQQ9 107 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 COX8AP10176 69 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
TRAF3-204ENST00000539721 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
TRAF3-204ENST00000539721 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
TRAF3-204ENST00000539721 TTTY13Q9BZ97 58 aa10.79□□□□□ -0.68
TRAF3-204ENST00000539721 SLC25A34Q6PIV7 304 aa10.77□□□□□ -0.68
TRAF3-204ENST00000539721 TOMM7Q9P0U1 55 aa10.77□□□□□ -0.68
TRAF3-204ENST00000539721 APOMO95445 188 aa10.77□□□□□ -0.69
TRAF3-204ENST00000539721 COX7B2Q8TF08 81 aa10.77□□□□□ -0.69
TRAF3-204ENST00000539721 ORAOV1Q8WV07 137 aa10.77□□□□□ -0.69
TRAF3-204ENST00000539721 UQCR10Q9UDW1 63 aa10.77□□□□□ -0.69
TRAF3-204ENST00000539721 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
TRAF3-204ENST00000539721 M0R2N4 97 aa10.76□□□□□ -0.69
TRAF3-204ENST00000539721 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
TRAF3-204ENST00000539721 MAPKAPK5-AS1Q8N8E1 139 aa10.76□□□□□ -0.69
TRAF3-204ENST00000539721 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
TRAF3-204ENST00000539721 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 ALMS1Q8TCU4 4167 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 PRSS2P07478 247 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 MIEN1Q9BRT3 115 aa10.75□□□□□ -0.69
TRAF3-204ENST00000539721 DLEU1O43261 78 aa10.74□□□□□ -0.69
TRAF3-204ENST00000539721 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
TRAF3-204ENST00000539721 Q8IZM0 81 aa10.73□□□□□ -0.69
TRAF3-204ENST00000539721 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
TRAF3-204ENST00000539721 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
TRAF3-204ENST00000539721 PSCAO43653 123 aa10.72□□□□□ -0.69
TRAF3-204ENST00000539721 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
TRAF3-204ENST00000539721 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.69
TRAF3-204ENST00000539721 NDUFA1O15239 70 aa10.71□□□□□ -0.69
TRAF3-204ENST00000539721 Q6ZR54 194 aa10.71□□□□□ -0.69
TRAF3-204ENST00000539721 C15orf56Q8N910 161 aa10.71□□□□□ -0.69
TRAF3-204ENST00000539721 KIAA0087Q14695 138 aa10.7□□□□□ -0.7
TRAF3-204ENST00000539721 SCGB1D4Q6XE38 83 aa10.7□□□□□ -0.7
TRAF3-204ENST00000539721 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
TRAF3-204ENST00000539721 HIGD2BQ4VC39 106 aa10.7□□□□□ -0.7
TRAF3-204ENST00000539721 CKS1BP61024 79 aa10.69□□□□□ -0.7
TRAF3-204ENST00000539721 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
TRAF3-204ENST00000539721 USP17L23D6RBM5 183 aa10.68□□□□□ -0.7
TRAF3-204ENST00000539721 ZNF561-AS1K7EIQ3 104 aa10.68□□□□□ -0.7
TRAF3-204ENST00000539721 DDTP30046 118 aa10.68□□□□□ -0.7
TRAF3-204ENST00000539721 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
TRAF3-204ENST00000539721 A0A0J9YXY3 114 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 CXCL5P42830 114 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 C2orf91Q6ZV80 131 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 C6orf223Q8N319 242 aa10.67□□□□□ -0.7
TRAF3-204ENST00000539721 DNAH6Q9C0G6 4158 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms