RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 TTC32Q5I0X7 151 aa10.46□□□□□ -0.73
VAMP1-207ENST00000539047 RMI2Q96E14 147 aa10.46□□□□□ -0.73
VAMP1-207ENST00000539047 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
VAMP1-207ENST00000539047 XCL1P47992 114 aa10.45□□□□□ -0.74
VAMP1-207ENST00000539047 DNAH7Q8WXX0 4024 aa10.44□□□□□ -0.74
VAMP1-207ENST00000539047 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
VAMP1-207ENST00000539047 CHCHD10Q8WYQ3 142 aaPredicted RBP10.44□□□□□ -0.74
VAMP1-207ENST00000539047 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
VAMP1-207ENST00000539047 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 CASC10Q5T4H9 136 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 CDPF1Q6NVV7 123 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 CD164L2Q6UWJ8 174 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 STPG4Q8N801 248 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 CDKN2A-AS1Q9UH64 79 aa10.43□□□□□ -0.74
VAMP1-207ENST00000539047 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
VAMP1-207ENST00000539047 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
VAMP1-207ENST00000539047 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
VAMP1-207ENST00000539047 E9PLD3 99 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 TSTD3H0UI37 97 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 COX7A2LO14548 114 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 MALP21145 153 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 NMUP48645 174 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 MAJINQ3KP22 176 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 PLEKHB2Q96CS7 222 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 Q9HAA7 133 aa10.41□□□□□ -0.74
VAMP1-207ENST00000539047 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 GAGE12HA6NDE8 117 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 APOMO95445 188 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 SPINK8P0C7L1 97 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
VAMP1-207ENST00000539047 COX6A2Q02221 97 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 COX11Q9Y6N1 276 aa10.4□□□□□ -0.74
VAMP1-207ENST00000539047 DYNC2H1Q8NCM8 4307 aaKnown RBP10.39□□□□□ -0.75
VAMP1-207ENST00000539047 A0A087WZ39 114 aa10.39□□□□□ -0.75
VAMP1-207ENST00000539047 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
VAMP1-207ENST00000539047 LEPROTO15243 131 aa10.39□□□□□ -0.75
VAMP1-207ENST00000539047 ANKRD39Q53RE8 183 aa10.39□□□□□ -0.75
VAMP1-207ENST00000539047 LINC01561Q8N1V8 128 aa10.39□□□□□ -0.75
VAMP1-207ENST00000539047 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
VAMP1-207ENST00000539047 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
VAMP1-207ENST00000539047 C5orf38Q86SI9 138 aa10.38□□□□□ -0.75
VAMP1-207ENST00000539047 TM2D2Q9BX73 214 aa10.38□□□□□ -0.75
VAMP1-207ENST00000539047 PRSS2P07478 247 aa10.37□□□□□ -0.75
VAMP1-207ENST00000539047 TENM2Q9NT68 2774 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 NBDYA0A0U1RRE5 68 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 J3QQQ9 107 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 LY6G6CO95867 125 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 FOXI1Q12951 378 aa10.36□□□□□ -0.75
VAMP1-207ENST00000539047 COX8AP10176 69 aa10.35□□□□□ -0.75
VAMP1-207ENST00000539047 SLC25A34Q6PIV7 304 aa10.35□□□□□ -0.75
VAMP1-207ENST00000539047 UQCR10Q9UDW1 63 aa10.35□□□□□ -0.75
VAMP1-207ENST00000539047 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 SFTA2Q6UW10 78 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 LINC00476Q8WZB0 136 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 PRO1933Q9H354 126 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 TOMM7Q9P0U1 55 aa10.34□□□□□ -0.75
VAMP1-207ENST00000539047 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 IGLV5-39A0A0G2JS06 123 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 ZNF815PA8K554 130 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 PSCAO43653 123 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 C14orf144Q96I85 54 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 SACSQ9NZJ4 4579 aa10.33□□□□□ -0.76
VAMP1-207ENST00000539047 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
VAMP1-207ENST00000539047 MYMXA0A1B0GTQ4 84 aa10.31□□□□□ -0.76
VAMP1-207ENST00000539047 DLEU1O43261 78 aa10.31□□□□□ -0.76
VAMP1-207ENST00000539047 CXCL5P42830 114 aa10.31□□□□□ -0.76
VAMP1-207ENST00000539047 Q8IZM0 81 aa10.31□□□□□ -0.76
VAMP1-207ENST00000539047 RYR2Q92736 4967 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 CKS1BP61024 79 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 PCP2Q8IVA1 136 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 NDUFA12Q9UI09 145 aa10.3□□□□□ -0.76
VAMP1-207ENST00000539047 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
VAMP1-207ENST00000539047 TSPEAR-AS2P59090 65 aa10.29□□□□□ -0.76
VAMP1-207ENST00000539047 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
VAMP1-207ENST00000539047 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
VAMP1-207ENST00000539047 STARD9Q9P2P6 4700 aa10.29□□□□□ -0.76
VAMP1-207ENST00000539047 LYSTQ99698 3801 aa10.28□□□□□ -0.76
VAMP1-207ENST00000539047 ZNF561-AS1K7EIQ3 104 aa10.28□□□□□ -0.76
VAMP1-207ENST00000539047 NDUFA1O15239 70 aa10.28□□□□□ -0.76
VAMP1-207ENST00000539047 HERV-K104P63124 156 aa10.28□□□□□ -0.76
VAMP1-207ENST00000539047 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
VAMP1-207ENST00000539047 M0R2N4 97 aa10.27□□□□□ -0.77
VAMP1-207ENST00000539047 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
VAMP1-207ENST00000539047 LINC00587B1AMM8 73 aa10.25□□□□□ -0.77
VAMP1-207ENST00000539047 F8WDY8 70 aa10.25□□□□□ -0.77
VAMP1-207ENST00000539047 CIRBPQ14011 172 aaKnown RBP10.25□□□□□ -0.77
VAMP1-207ENST00000539047 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
VAMP1-207ENST00000539047 C6orf223Q8N319 242 aa10.25□□□□□ -0.77
VAMP1-207ENST00000539047 PCP4L1A6NKN8 68 aa10.24□□□□□ -0.77
VAMP1-207ENST00000539047 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
VAMP1-207ENST00000539047 DDTP30046 118 aa10.24□□□□□ -0.77
VAMP1-207ENST00000539047 MEIG1Q5JSS6 88 aa10.24□□□□□ -0.77
VAMP1-207ENST00000539047 MAPKAPK5-AS1Q8N8E1 139 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms