RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
CD4-208ENST00000538827 PRR34Q9NV39 138 aa9.54□□□□□ -0.88
CD4-208ENST00000538827 HECTD4Q9Y4D8 3996 aa9.54□□□□□ -0.88
CD4-208ENST00000538827 TINCRA0A1B0GVN0 87 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 SMIM6P0DI80 62 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 SEC11AP67812 179 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 TTC32Q5I0X7 151 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 LINC00242Q5T6M2 205 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 NFE4Q86UQ8 179 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
CD4-208ENST00000538827 LINC00476Q8WZB0 136 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
CD4-208ENST00000538827 IGKV2D-24A0A075B6R9 120 aa9.52□□□□□ -0.89
CD4-208ENST00000538827 ZNF22P17026 224 aaPredicted RBP9.52□□□□□ -0.89
CD4-208ENST00000538827 HERVK_113P63121 156 aa9.52□□□□□ -0.89
CD4-208ENST00000538827 COX6A2Q02221 97 aa9.52□□□□□ -0.89
CD4-208ENST00000538827 MIAQ16674 131 aa9.52□□□□□ -0.89
CD4-208ENST00000538827 KIAA1109Q2LD37 5005 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 hDV102S1A0JD36 115 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 IBA57-AS1B1ANH7 110 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 HSBP1L1C9JCN9 74 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 KRTAP1-5Q9BYS1 174 aa9.51□□□□□ -0.89
CD4-208ENST00000538827 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 TRAV8-4A0A0B4J246 113 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 NBDYA0A0U1RRE5 68 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 H3BRM9 83 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 M0R2N4 97 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 HERVK_113P61574 105 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
CD4-208ENST00000538827 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 SPINK8P0C7L1 97 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 C5orf38Q86SI9 138 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 RMI2Q96E14 147 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 CDKN2A-AS1Q9UH64 79 aa9.49□□□□□ -0.89
CD4-208ENST00000538827 K7EP13 123 aa9.48□□□□□ -0.89
CD4-208ENST00000538827 CD164L2Q6UWJ8 174 aa9.48□□□□□ -0.89
CD4-208ENST00000538827 STPG4Q8N801 248 aa9.48□□□□□ -0.89
CD4-208ENST00000538827 PAM16Q9Y3D7 125 aa9.48□□□□□ -0.89
CD4-208ENST00000538827 DNAH6Q9C0G6 4158 aa9.48□□□□□ -0.89
CD4-208ENST00000538827 IGLV5-45A0A087WSX0 123 aa9.47□□□□□ -0.89
CD4-208ENST00000538827 COX7A2LO14548 114 aa9.47□□□□□ -0.89
CD4-208ENST00000538827 MALP21145 153 aa9.47□□□□□ -0.89
CD4-208ENST00000538827 TMEM223A0PJW6 202 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 S100A12P80511 92 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 FOXI1Q12951 378 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 SPATA45Q537H7 98 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 ANKRD39Q53RE8 183 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 C12orf57Q99622 126 aa9.46□□□□□ -0.9
CD4-208ENST00000538827 IGHV3OR16-9A0A0B4J2B5 98 aa9.45□□□□□ -0.9
CD4-208ENST00000538827 DNAH10Q8IVF4 4471 aa9.45□□□□□ -0.9
CD4-208ENST00000538827 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
CD4-208ENST00000538827 NMUP48645 174 aa9.44□□□□□ -0.9
CD4-208ENST00000538827 KMT2AQ03164 3969 aa9.44□□□□□ -0.9
CD4-208ENST00000538827 A0A087WZ39 114 aa9.43□□□□□ -0.9
CD4-208ENST00000538827 PSCAO43653 123 aa9.43□□□□□ -0.9
CD4-208ENST00000538827 ORAOV1Q8WV07 137 aa9.43□□□□□ -0.9
CD4-208ENST00000538827 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
CD4-208ENST00000538827 TOMM7Q9P0U1 55 aa9.43□□□□□ -0.9
CD4-208ENST00000538827 E9PLD3 99 aa9.42□□□□□ -0.9
CD4-208ENST00000538827 APOMO95445 188 aa9.42□□□□□ -0.9
CD4-208ENST00000538827 KRTAP26-1Q6PEX3 210 aa9.42□□□□□ -0.9
CD4-208ENST00000538827 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CD4-208ENST00000538827 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
CD4-208ENST00000538827 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
CD4-208ENST00000538827 LEPROTO15243 131 aa9.41□□□□□ -0.9
CD4-208ENST00000538827 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
CD4-208ENST00000538827 PLEKHB2Q96CS7 222 aa9.41□□□□□ -0.9
CD4-208ENST00000538827 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
CD4-208ENST00000538827 PRSS2P07478 247 aa9.4□□□□□ -0.9
CD4-208ENST00000538827 TSPEAR-AS2P59090 65 aa9.4□□□□□ -0.9
CD4-208ENST00000538827 SPAG11BQ08648 103 aa9.4□□□□□ -0.9
CD4-208ENST00000538827 LINC01561Q8N1V8 128 aa9.4□□□□□ -0.9
CD4-208ENST00000538827 HIGD2BQ4VC39 106 aa9.39□□□□□ -0.91
CD4-208ENST00000538827 CFAP161Q6P656 301 aa9.39□□□□□ -0.91
CD4-208ENST00000538827 Q6ZR54 194 aa9.39□□□□□ -0.91
CD4-208ENST00000538827 C6orf223Q8N319 242 aa9.39□□□□□ -0.91
CD4-208ENST00000538827 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
CD4-208ENST00000538827 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
CD4-208ENST00000538827 J3QQQ9 107 aa9.38□□□□□ -0.91
CD4-208ENST00000538827 LECT2O14960 151 aa9.38□□□□□ -0.91
CD4-208ENST00000538827 TTTY13Q9BZ97 58 aa9.38□□□□□ -0.91
CD4-208ENST00000538827 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
CD4-208ENST00000538827 ABCA13Q86UQ4 5058 aa9.37□□□□□ -0.91
CD4-208ENST00000538827 USP17L23D6RBM5 183 aa9.37□□□□□ -0.91
CD4-208ENST00000538827 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
CD4-208ENST00000538827 ZNF815PA8K554 130 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 C1orf134Q5TEV5 83 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 PCP2Q8IVA1 136 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 LINC00526Q96FQ7 95 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 C14orf144Q96I85 54 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
CD4-208ENST00000538827 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
CD4-208ENST00000538827 Q8IZM0 81 aa9.35□□□□□ -0.91
CD4-208ENST00000538827 MAPKAPK5-AS1Q8N8E1 139 aa9.35□□□□□ -0.91
CD4-208ENST00000538827 NDUFA12Q9UI09 145 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms