RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, human

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDFT1-222	ENST00000538689		Q6ZUT4	128 aa		4.93	□□□□□ -1.62
FDFT1-222	ENST00000538689	PRO0255	Q9UI72	69 aa		4.93	□□□□□ -1.62
FDFT1-222	ENST00000538689	TMEM223	A0PJW6	202 aa		4.93	□□□□□ -1.62
FDFT1-222	ENST00000538689	DEFB4A	O15263	64 aa		4.93	□□□□□ -1.62
FDFT1-222	ENST00000538689	TMEM243	Q9BU79	118 aa		4.93	□□□□□ -1.62
FDFT1-222	ENST00000538689	TRBV6-8	A0A0A6YYG3	113 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	UBE2D1	P51668	147 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	CDC42SE2	Q9NRR3	84 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	ZNF815P	A8K554	130 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689		J3QQQ9	107 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689		K7ERU9	68 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	UBE2L6	O14933	153 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	SPART-AS1	P0CW21	52 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	DAD1	P61803	113 aa		4.92	□□□□□ -1.62
FDFT1-222	ENST00000538689	MEGF8	Q7Z7M0	2845 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689		A6NDN8	102 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	LEPROT	O15243	131 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	TSPEAR-AS2	P59090	65 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	TAL2	Q16559	108 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	AMMECR1L	Q6DCA0	310 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	FAM19A3	Q7Z5A8	133 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	OR5A1	Q8NGJ0	315 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	CELA1	Q9UNI1	258 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	COX11	Q9Y6N1	276 aa		4.91	□□□□□ -1.62
FDFT1-222	ENST00000538689	IGLV5-45	A0A087WSX0	123 aa		4.9	□□□□□ -1.62
FDFT1-222	ENST00000538689	PAX4	O43316	350 aa		4.9	□□□□□ -1.62
FDFT1-222	ENST00000538689	CEND1	Q8N111	149 aa		4.9	□□□□□ -1.62
FDFT1-222	ENST00000538689	ATP6V0E2	Q8NHE4	81 aa		4.9	□□□□□ -1.62
FDFT1-222	ENST00000538689	TMEM101	Q96IK0	257 aa		4.9	□□□□□ -1.62
FDFT1-222	ENST00000538689	TEX48	A0A1B0GUV7	120 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	TAX1BP3	O14907	124 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	ATP5G1	P05496	136 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	HERVK_113	P63121	156 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	C6orf226	Q5I0X4	101 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	SCGB1D4	Q6XE38	83 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	PLEKHB2	Q96CS7	222 aa		4.9	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGHV1-58	A0A0C4DH39	117 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGHV3-30-3	P0DP02	117 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	SCGB1A1	P11684	91 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	LGALS3	P17931	250 aa	Known RBP	4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	FOXI1	Q12951	378 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	LINC00242	Q5T6M2	205 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	VSIG2	Q96IQ7	327 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	HIST1H4G	Q99525	98 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	CDKN2A-AS1	Q9UH64	79 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	FBN3	Q75N90	2809 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689		A0A0J9YY99	117 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689		H3BRM9	83 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	FXYD2	P54710	66 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689		Q6ZVH6	145 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	CHCHD5	Q9BSY4	110 aa		4.89	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGHV3-64	A0A075B6Q5	118 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	TRAV8-3	A0A0A6YYJ7	113 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	TRAV13-1	A0A0B4J241	112 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	GAGE6	Q13070	117 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	PRKDC	P78527	4128 aa	Known RBP	4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689		A0A1B0GUV1	79 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689		F5H768	121 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	COX6A2	Q02221	97 aa		4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.88	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGLV4-60	A0A075B6I1	120 aa		4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	SPINK8	P0C7L1	97 aa		4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	MRPL23	Q16540	153 aa	Known RBP	4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	KPRP	Q5T749	579 aa	Predicted RBP	4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	C11orf68	Q9H3H3	251 aa	Known RBP	4.87	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGLV5-39	A0A0G2JS06	123 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	SMIM13	P0DJ93	91 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	C12orf74	Q32Q52	190 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	SH2D6	Q7Z4S9	175 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	C10orf126	Q8N4M7	172 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	RETN	Q9HD89	108 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689		A0A096LPF7	62 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	ZFAND6	Q6FIF0	208 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	TENM3	Q9P273	2699 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689	NDUFA12	Q9UI09	145 aa		4.86	□□□□□ -1.63
FDFT1-222	ENST00000538689		A0A0J9YXY3	114 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689		A0A1B0GWB2	263 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	SMIM1	B2RUZ4	78 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689		K7EIL1	84 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	HTN3	P15516	51 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	NHP2	Q9NX24	153 aa	Known RBP	4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	TMEM262	E9PQX1	116 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGHV3-30	P01768	117 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	IGHV3-30-5	P0DP03	117 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	LINC00476	Q8WZB0	136 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689	ICOS	Q9Y6W8	199 aa		4.85	□□□□□ -1.63
FDFT1-222	ENST00000538689		H3BNG1	76 aa		4.84	□□□□□ -1.63
FDFT1-222	ENST00000538689		K7ERJ3	54 aa		4.84	□□□□□ -1.63
FDFT1-222	ENST00000538689	VAMP3	Q15836	100 aa		4.84	□□□□□ -1.63
FDFT1-222	ENST00000538689	RAB37	Q96AX2	223 aa		4.84	□□□□□ -1.63
FDFT1-222	ENST00000538689	COL7A1	Q02388	2944 aa		4.84	□□□□□ -1.64
FDFT1-222	ENST00000538689	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.84	□□□□□ -1.64
FDFT1-222	ENST00000538689	LINC00959	A0A1B0GUT2	108 aa		4.84	□□□□□ -1.64
FDFT1-222	ENST00000538689	NDUFA1	O15239	70 aa		4.84	□□□□□ -1.64
FDFT1-222	ENST00000538689	LITAF	Q99732	161 aa		4.84	□□□□□ -1.64
FDFT1-222	ENST00000538689	IGKV3OR2-268	A0A0C4DH90	116 aa		4.83	□□□□□ -1.64
FDFT1-222	ENST00000538689		H3BUT2	72 aa		4.83	□□□□□ -1.64
FDFT1-222	ENST00000538689	CKS1B	P61024	79 aa		4.83	□□□□□ -1.64
FDFT1-222	ENST00000538689	LELP1	Q5T871	98 aa		4.83	□□□□□ -1.64

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