RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
LPCAT3-206ENST00000537179 KRTAP10-6P60371 365 aaPredicted RBP8.66□□□□□ -1.02
LPCAT3-206ENST00000537179 IMMP2LQ96T52 175 aa8.66□□□□□ -1.02
LPCAT3-206ENST00000537179 SMCO4Q9NRQ5 59 aa8.66□□□□□ -1.02
LPCAT3-206ENST00000537179 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
LPCAT3-206ENST00000537179 G3V3Q6 166 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 OR2D3Q8NGH3 330 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 SEC11CQ9BY50 192 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 CDC42SE2Q9NRR3 84 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 ANAPC11Q9NYG5 84 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
LPCAT3-206ENST00000537179 GIPP09681 153 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-206ENST00000537179 TRGC1P0CF51 173 aa8.64□□□□□ -1.03
LPCAT3-206ENST00000537179 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
LPCAT3-206ENST00000537179 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-206ENST00000537179 S100A2P29034 98 aa8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 LINC00337Q8N6G1 96 aa8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 SMDT1Q9H4I9 107 aa8.63□□□□□ -1.03
LPCAT3-206ENST00000537179 PPBPP02775 128 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 FHITP49789 147 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 PYY3Q5JQD4 70 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 BAGE2Q86Y30 109 aa8.62□□□□□ -1.03
LPCAT3-206ENST00000537179 NUPR1O60356 82 aa8.61□□□□□ -1.03
LPCAT3-206ENST00000537179 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
LPCAT3-206ENST00000537179 CTDSP1Q9GZU7 261 aa8.61□□□□□ -1.03
LPCAT3-206ENST00000537179 SDHAF1A6NFY7 115 aa8.6□□□□□ -1.03
LPCAT3-206ENST00000537179 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
LPCAT3-206ENST00000537179 OR10D4PQ8NGN7 298 aa8.6□□□□□ -1.03
LPCAT3-206ENST00000537179 C6orf48Q9UBA6 75 aa8.6□□□□□ -1.03
LPCAT3-206ENST00000537179 USH2AO75445 5202 aa8.6□□□□□ -1.03
LPCAT3-206ENST00000537179 NDUFA1O15239 70 aa8.59□□□□□ -1.03
LPCAT3-206ENST00000537179 NUDT10Q8NFP7 164 aa8.59□□□□□ -1.03
LPCAT3-206ENST00000537179 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
LPCAT3-206ENST00000537179 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 M0R143 59 aa8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 C9orf129Q5T035 196 aaKnown RBP8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 CBLN2Q8IUK8 224 aa8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 ORAOV1Q8WV07 137 aa8.58□□□□□ -1.04
LPCAT3-206ENST00000537179 MAP1LC3B2A6NCE7 125 aa8.57□□□□□ -1.04
LPCAT3-206ENST00000537179 CEBPGP53567 150 aa8.57□□□□□ -1.04
LPCAT3-206ENST00000537179 UNQ6190/PRO20217Q6UXQ8 127 aa8.57□□□□□ -1.04
LPCAT3-206ENST00000537179 FP248Q71RG6 208 aaPredicted RBP8.57□□□□□ -1.04
LPCAT3-206ENST00000537179 MAP1LC3BQ9GZQ8 125 aa8.57□□□□□ -1.04
LPCAT3-206ENST00000537179 F2Z2F3 143 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 F8WDY8 70 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 I3L3M4 83 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 PMCHP20382 165 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 CTRLP40313 264 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 RNASE13Q5GAN3 156 aaKnown RBP8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 LYZL1Q6UWQ5 148 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 ALKAL2Q6UX46 152 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 TMEM242Q9NWH2 141 aa8.56□□□□□ -1.04
LPCAT3-206ENST00000537179 TRAV13-1A0A0B4J241 112 aa8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 PAGE4O60829 102 aa8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 RPS20P60866 119 aaKnown RBP8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 TMEM241Q24JQ0 296 aa8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
LPCAT3-206ENST00000537179 SSNA1O43805 119 aa8.54□□□□□ -1.04
LPCAT3-206ENST00000537179 ARPC5O15511 151 aa8.53□□□□□ -1.04
LPCAT3-206ENST00000537179 BCE1O60756 84 aa8.53□□□□□ -1.04
LPCAT3-206ENST00000537179 RAB5AP20339 215 aa8.53□□□□□ -1.04
LPCAT3-206ENST00000537179 FLGP20930 4061 aaPredicted RBP8.53□□□□□ -1.04
LPCAT3-206ENST00000537179 ADCYAP1P18509 176 aa8.52□□□□□ -1.05
LPCAT3-206ENST00000537179 ZNF345Q14585 488 aa8.52□□□□□ -1.05
LPCAT3-206ENST00000537179 RPL7L1Q6DKI1 246 aaKnown RBP8.52□□□□□ -1.05
LPCAT3-206ENST00000537179 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
LPCAT3-206ENST00000537179 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 IGKV2D-26A0A0A0MRZ7 120 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 C7orf77A4D0Y5 90 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 NPSP0C0P6 89 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 JOSD1Q15040 202 aaPredicted RBP8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 TWIST1Q15672 202 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 AKR1C8PQ5T2L2 129 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 C22orf24Q9Y442 160 aa8.51□□□□□ -1.05
LPCAT3-206ENST00000537179 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
LPCAT3-206ENST00000537179 SNHG12Q9BXW3 62 aa8.5□□□□□ -1.05
LPCAT3-206ENST00000537179 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 XKRY2A2RUG3 117 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 IFNA1P01562 189 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 Q6ZUT4 128 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 KCNRGQ8N5I3 272 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 CNFNQ9BYD5 112 aa8.49□□□□□ -1.05
LPCAT3-206ENST00000537179 IFITM10A6NMD0 228 aa8.48□□□□□ -1.05
LPCAT3-206ENST00000537179 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
LPCAT3-206ENST00000537179 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
LPCAT3-206ENST00000537179 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
LPCAT3-206ENST00000537179 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
LPCAT3-206ENST00000537179 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
LPCAT3-206ENST00000537179 TRBV30A0A0K0K1B3 111 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms