RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SHISA2Q6UWI4 295 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 UNQ9165/PRO28630Q6UXU0 137 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 C5orf38Q86SI9 138 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 MUC7Q8TAX7 377 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 LITAFQ99732 161 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 PLXNB1O43157 2135 aa4.28□□□□□ -1.72
CHD4-206ENST00000536999 TRAV8-3A0A0A6YYJ7 113 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 TRAV25A0A0B4J276 109 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 IGLV5-39A0A0G2JS06 123 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 TRBV10-3A0A0K0K1G6 114 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
CHD4-206ENST00000536999 BEAN1Q3B7T3 259 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 C5orf47Q569G3 176 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 GAGE2AQ6NT46 116 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 C11orf44Q8N8P7 122 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 LINC00308Q8TCZ7 52 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 RPL36ALQ969Q0 106 aaKnown RBP4.27□□□□□ -1.73
CHD4-206ENST00000536999 UBE2D4Q9Y2X8 147 aa4.27□□□□□ -1.73
CHD4-206ENST00000536999 CR1P17927 2039 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 ARFGEF3Q5TH69 2177 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 FAM236AA0A1B0GUQ0 79 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 FAM236BA0A1B0GV22 79 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 B4DSR2 109 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 INSP01308 110 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 CRPP02741 224 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 PSMB8P28062 276 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 PRB3Q04118 309 aaPredicted RBP4.26□□□□□ -1.73
CHD4-206ENST00000536999 UBE2E2Q96LR5 201 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 VWFP04275 2813 aa4.26□□□□□ -1.73
CHD4-206ENST00000536999 hADV29S1A0JD25 119 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 UBE2L6O14933 153 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 NDUFC2O95298 119 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 TGFAP01135 160 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 PDE6GP18545 87 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 MALP21145 153 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 CFHR3Q02985 330 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 Q6JHZ5 121 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 LINC01561Q8N1V8 128 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 DUX3Q96PT4 197 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 BPESC1Q9GZL8 116 aa4.25□□□□□ -1.73
CHD4-206ENST00000536999 ADARB2-AS1A8MUL3 147 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 IBA57-AS1B1ANH7 110 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 F6UB75 175 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 H3BUX3 64 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 TMEM256-PLSCR3K7ERE1 68 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 RS1O15537 224 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 MSMBP08118 114 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 RPL18AQ02543 176 aaKnown RBP4.24□□□□□ -1.73
CHD4-206ENST00000536999 TMEM86BQ8N661 226 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 SERP2Q8N6R1 65 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 DUX5Q96PT3 197 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 Q9H8V8 135 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 WNK2Q9Y3S1 2297 aa4.24□□□□□ -1.73
CHD4-206ENST00000536999 LINC01548A6NM66 108 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 IGHV3-11P01762 117 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 HIST1H4AP62805 103 aaKnown RBP4.23□□□□□ -1.73
CHD4-206ENST00000536999 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 LINC01587Q99440 93 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 CHCHD5Q9BSY4 110 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 CHCHD7Q9BUK0 85 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 LINC00527Q9UJ94 153 aa4.23□□□□□ -1.73
CHD4-206ENST00000536999 EPPK1P58107 5090 aaKnown RBP4.23□□□□□ -1.73
CHD4-206ENST00000536999 IGKV3-7A0A075B6H7 116 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 IGHV3-64A0A075B6Q5 118 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 NDUFC1O43677 76 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 Q6ZQT7 251 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 C10orf105Q8TEF2 133 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 CLEC2BQ92478 149 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 OBSCN-AS1Q96MR7 158 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 TMEM243Q9BU79 118 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 JPT2Q9H910 190 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 ORMDL1Q9P0S3 153 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 VPREB3Q9UKI3 123 aa4.22□□□□□ -1.73
CHD4-206ENST00000536999 TENM3Q9P273 2699 aa4.21□□□□□ -1.73
CHD4-206ENST00000536999 IGHV3OR16-10A0A075B7F0 116 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 IGHV4-30-2A0A087WSY4 118 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 LY6HO94772 140 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 TRBV12-3P01733 135 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 IGHV4-31P0DP07 118 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 PRB4P10163 310 aaPredicted RBP4.21□□□□□ -1.74
CHD4-206ENST00000536999 ATP5EP56381 51 aaPredicted RBP4.21□□□□□ -1.74
CHD4-206ENST00000536999 COX17Q14061 63 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 LINC00242Q5T6M2 205 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 DYNLRB2Q8TF09 96 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 ZNF625Q96I27 306 aaPredicted RBP4.21□□□□□ -1.74
CHD4-206ENST00000536999 OPRPNQ99935 248 aaPredicted RBP4.21□□□□□ -1.74
CHD4-206ENST00000536999 UBL5Q9BZL1 73 aa4.21□□□□□ -1.74
CHD4-206ENST00000536999 KLK5Q9Y337 293 aaPredicted RBP4.21□□□□□ -1.74
CHD4-206ENST00000536999 TRAV12-2A0A075B6T6 113 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 TRBV6-4A0A1B0GX49 114 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 SMIM1B2RUZ4 78 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 K7EQD1 137 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 EIF4EBP3O60516 100 aaPredicted RBP4.2□□□□□ -1.74
CHD4-206ENST00000536999 LINC01356Q8N9X3 169 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 MRAPQ8TCY5 172 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
CHD4-206ENST00000536999 CDC42SE2Q9NRR3 84 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms