RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 C14orf132Q9NPU4 83 aa11.2□□□□□ -0.62
CHFR-213ENST00000536843 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
CHFR-213ENST00000536843 SMIM1B2RUZ4 78 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
CHFR-213ENST00000536843 FAM19A3Q7Z5A8 133 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 J3QLI3 93 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 LINC00242Q5T6M2 205 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 Q9UF83 564 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 NACAE9PAV3 2078 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 POLQO75417 2590 aa11.19□□□□□ -0.62
CHFR-213ENST00000536843 IGHV3OR16-12A0A075B7B8 117 aa11.18□□□□□ -0.62
CHFR-213ENST00000536843 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
CHFR-213ENST00000536843 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
CHFR-213ENST00000536843 NDUFC2O95298 119 aa11.17□□□□□ -0.62
CHFR-213ENST00000536843 FHL2Q14192 279 aa11.17□□□□□ -0.62
CHFR-213ENST00000536843 PIK3CD-AS1Q5SR53 167 aa11.17□□□□□ -0.62
CHFR-213ENST00000536843 Q6ZSN1 163 aa11.17□□□□□ -0.62
CHFR-213ENST00000536843 FBN2P35556 2912 aa11.16□□□□□ -0.62
CHFR-213ENST00000536843 CRPP02741 224 aa11.16□□□□□ -0.62
CHFR-213ENST00000536843 KRTAP10-9P60411 292 aa11.16□□□□□ -0.62
CHFR-213ENST00000536843 A0A087WYN8 130 aa11.16□□□□□ -0.62
CHFR-213ENST00000536843 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
CHFR-213ENST00000536843 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
CHFR-213ENST00000536843 K7EQG2 157 aa11.15□□□□□ -0.62
CHFR-213ENST00000536843 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
CHFR-213ENST00000536843 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.63
CHFR-213ENST00000536843 LINC00337Q8N6G1 96 aa11.15□□□□□ -0.63
CHFR-213ENST00000536843 TENM4Q6N022 2769 aa11.15□□□□□ -0.63
CHFR-213ENST00000536843 H0YGX0 51 aa11.14□□□□□ -0.63
CHFR-213ENST00000536843 FSHBP01225 129 aa11.14□□□□□ -0.63
CHFR-213ENST00000536843 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
CHFR-213ENST00000536843 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
CHFR-213ENST00000536843 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
CHFR-213ENST00000536843 Q6YL49 198 aa11.14□□□□□ -0.63
CHFR-213ENST00000536843 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
CHFR-213ENST00000536843 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
CHFR-213ENST00000536843 DOPEY2Q9Y3R5 2298 aa11.13□□□□□ -0.63
CHFR-213ENST00000536843 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
CHFR-213ENST00000536843 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
CHFR-213ENST00000536843 DEFB113Q30KQ7 82 aa11.13□□□□□ -0.63
CHFR-213ENST00000536843 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
CHFR-213ENST00000536843 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
CHFR-213ENST00000536843 IGHV3-53P01767 116 aa11.12□□□□□ -0.63
CHFR-213ENST00000536843 EPM2AB3EWF7 344 aa11.11□□□□□ -0.63
CHFR-213ENST00000536843 SMIM11BQ8TCY0 68 aa11.11□□□□□ -0.63
CHFR-213ENST00000536843 PTPN13Q12923 2485 aa11.11□□□□□ -0.63
CHFR-213ENST00000536843 ATP5EP2Q5VTU8 51 aa11.11□□□□□ -0.63
CHFR-213ENST00000536843 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
CHFR-213ENST00000536843 HELZ2Q9BYK8 2649 aaKnown RBP11.1□□□□□ -0.63
CHFR-213ENST00000536843 GHRHP01286 108 aa11.09□□□□□ -0.63
CHFR-213ENST00000536843 NCR3O14931 201 aa11.09□□□□□ -0.63
CHFR-213ENST00000536843 CCKP06307 115 aa11.09□□□□□ -0.63
CHFR-213ENST00000536843 C18orf65Q6ZTR6 163 aa11.09□□□□□ -0.63
CHFR-213ENST00000536843 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
CHFR-213ENST00000536843 HTN1P15515 57 aa11.08□□□□□ -0.64
CHFR-213ENST00000536843 UBE2E2Q96LR5 201 aa11.08□□□□□ -0.64
CHFR-213ENST00000536843 LECT2O14960 151 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 PFN2P35080 140 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 TMEM243Q9BU79 118 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 FAM236DA0A1B0GTK5 79 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
CHFR-213ENST00000536843 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
CHFR-213ENST00000536843 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
CHFR-213ENST00000536843 FAM236CP0DP71 79 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 HILS1P60008 231 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 MIR7-3HGQ8N6C7 128 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 PRO0628Q9UI54 55 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 CR1P17927 2039 aa11.07□□□□□ -0.64
CHFR-213ENST00000536843 ABCA12Q86UK0 2595 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 DEFB136Q30KP8 78 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 SLURP1P55000 103 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 SS18Q15532 418 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 LYPD5Q6UWN5 251 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 Q96MF0 132 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
CHFR-213ENST00000536843 SERP1Q9Y6X1 66 aa11.05□□□□□ -0.64
CHFR-213ENST00000536843 MXRA5Q9NR99 2828 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 SORL1Q92673 2214 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 TRBV10-3A0A0K0K1G6 114 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 A8MTW9 85 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 XCL1P47992 114 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 XCL2Q9UBD3 114 aa11.04□□□□□ -0.64
CHFR-213ENST00000536843 TRAV23DV6A0A075B6W5 121 aa11.03□□□□□ -0.64
CHFR-213ENST00000536843 C20orf197Q8N268 126 aa11.03□□□□□ -0.64
CHFR-213ENST00000536843 APCP25054 2843 aa11.03□□□□□ -0.64
CHFR-213ENST00000536843 PRM2P04554 102 aa11.03□□□□□ -0.64
CHFR-213ENST00000536843 CDC42SE2Q9NRR3 84 aa11.03□□□□□ -0.64
CHFR-213ENST00000536843 CCL18P55774 89 aa11.01□□□□□ -0.65
CHFR-213ENST00000536843 RPL36AP83881 106 aaKnown RBP11.01□□□□□ -0.65
CHFR-213ENST00000536843 C11orf72Q8NBR9 251 aa11.01□□□□□ -0.65
CHFR-213ENST00000536843 RPL36ALQ969Q0 106 aaKnown RBP11.01□□□□□ -0.65
CHFR-213ENST00000536843 CREBBPQ92793 2442 aa11.01□□□□□ -0.65
CHFR-213ENST00000536843 KRTAP1-3Q8IUG1 177 aa11.01□□□□□ -0.65
CHFR-213ENST00000536843 H7BZZ5 65 aa11□□□□□ -0.65
CHFR-213ENST00000536843 BCE1O60756 84 aa11□□□□□ -0.65
CHFR-213ENST00000536843 SLPIP03973 132 aa11□□□□□ -0.65
CHFR-213ENST00000536843 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
CHFR-213ENST00000536843 FAM19A1Q7Z5A9 133 aa11□□□□□ -0.65
CHFR-213ENST00000536843 COX7B2Q8TF08 81 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms