RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TRAV8-3A0A0A6YYJ7 113 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 ADARB2-AS1A8MUL3 147 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
CPSF7-216ENST00000536548 ZNF415Q09FC8 603 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 ADAMTSL4-AS1Q5T5F5 129 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 KPRPQ5T749 579 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-216ENST00000536548 DAND5Q8N907 189 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 DUX3Q96PT4 197 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 OVOL2Q9BRP0 275 aa5.66□□□□□ -1.5
CPSF7-216ENST00000536548 DNAH7Q8WXX0 4024 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 IGLV5-45A0A087WSX0 123 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 UQCRQO14949 82 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 HERVK_113P63121 156 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 CFHR3Q02985 330 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 SPINK13Q1W4C9 94 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 C9orf153Q5TBE3 101 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 FAM222AQ5U5X8 452 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 C3orf22Q8N5N4 141 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 LINC01587Q99440 93 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 UBE2D4Q9Y2X8 147 aa5.65□□□□□ -1.5
CPSF7-216ENST00000536548 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 FAM236AA0A1B0GUQ0 79 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 FAM236BA0A1B0GV22 79 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 H3BUX3 64 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 FSHBP01225 129 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 LY6EQ16553 131 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 DGAT2L7PQ6IED9 249 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 LINC00308Q8TCZ7 52 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
CPSF7-216ENST00000536548 IGHV3OR16-10A0A075B7F0 116 aa5.63□□□□□ -1.51
CPSF7-216ENST00000536548 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
CPSF7-216ENST00000536548 PF4P02776 101 aa5.63□□□□□ -1.51
CPSF7-216ENST00000536548 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
CPSF7-216ENST00000536548 LINC00467Q9BRT7 94 aa5.63□□□□□ -1.51
CPSF7-216ENST00000536548 IGLV5-39A0A0G2JS06 123 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 ATOX1O00244 68 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 NDUFA7O95182 113 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 NPC2P61916 151 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 TMEM95Q3KNT9 176 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 FAM19A3Q7Z5A8 133 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 FAM104AQ969W3 186 aa5.62□□□□□ -1.51
CPSF7-216ENST00000536548 CITED2Q99967 270 aaPredicted RBP5.62□□□□□ -1.51
CPSF7-216ENST00000536548 TRAV13-2A0A0B4J235 113 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 A0A1B0GX51 115 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 A8MTW9 85 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 IGHV3-53P01767 116 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 BAALC-AS2P0C853 105 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 PSMB8P28062 276 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 CEMP1Q6PRD7 247 aaPredicted RBP5.61□□□□□ -1.51
CPSF7-216ENST00000536548 BRD3OSQ6XYD6 125 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 Q9H8V8 135 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 VPREB3Q9UKI3 123 aa5.61□□□□□ -1.51
CPSF7-216ENST00000536548 HUWE1Q7Z6Z7 4374 aaKnown RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 IGKV2-29A2NJV5 120 aaPredicted RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 J3KT08 172 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 J3QLI3 93 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 RS1O15537 224 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 COX7CP15954 63 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 BLCAPP62952 87 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 DAZ2Q13117 558 aaKnown RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 Q6ZSV7 163 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 DAZ4Q86SG3 579 aaKnown RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 C5orf38Q86SI9 138 aa5.6□□□□□ -1.51
CPSF7-216ENST00000536548 DAZ3Q9NR90 486 aaKnown RBP5.6□□□□□ -1.51
CPSF7-216ENST00000536548 IGHV3-73A0A0B4J1V6 119 aa5.59□□□□□ -1.51
CPSF7-216ENST00000536548 CRPP02741 224 aa5.59□□□□□ -1.51
CPSF7-216ENST00000536548 IGHV4-38-2P0DP08 117 aa5.59□□□□□ -1.51
CPSF7-216ENST00000536548 EDN2P20800 178 aa5.59□□□□□ -1.51
CPSF7-216ENST00000536548 RNASE13Q5GAN3 156 aaKnown RBP5.59□□□□□ -1.51
CPSF7-216ENST00000536548 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
CPSF7-216ENST00000536548 STARD9Q9P2P6 4700 aa5.59□□□□□ -1.51
CPSF7-216ENST00000536548 A8MZ25 164 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 H0YGX0 51 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 DNAL4O96015 105 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 CRYGAP11844 174 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 MALP21145 153 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
CPSF7-216ENST00000536548 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
CPSF7-216ENST00000536548 LCE2DQ5TA82 110 aaPredicted RBP5.58□□□□□ -1.52
CPSF7-216ENST00000536548 Q6JHZ5 121 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 GAGE2AQ6NT46 116 aa5.58□□□□□ -1.52
CPSF7-216ENST00000536548 TRBV10-1A0A0K0K1A3 114 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 SMIM1B2RUZ4 78 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 K7EIL1 84 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 INSP01308 110 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 SYNJ2BPP57105 145 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 PROK1P58294 105 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
CPSF7-216ENST00000536548 LINC00242Q5T6M2 205 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 LINC01006Q8NI28 216 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
CPSF7-216ENST00000536548 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
CPSF7-216ENST00000536548 MUC4Q99102 2169 aa5.56□□□□□ -1.52
CPSF7-216ENST00000536548 STAB2Q8WWQ8 2551 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms