RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 COX7A2LO14548 114 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 TRGC2P03986 189 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 LINC00614P0C842 121 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 PMCHL1Q16048 86 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 SCGB3A1Q96QR1 104 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 TIMM17AQ99595 171 aa11.52□□□□□ -0.57
DDX55-204ENST00000536079 ABCA13Q86UQ4 5058 aa11.51□□□□□ -0.57
DDX55-204ENST00000536079 VCX2Q9H322 139 aa11.51□□□□□ -0.57
DDX55-204ENST00000536079 FAT1Q14517 4588 aa11.51□□□□□ -0.57
DDX55-204ENST00000536079 PANO1I0J062 215 aa11.5□□□□□ -0.57
DDX55-204ENST00000536079 SDIM1Q6ZPB5 146 aa11.5□□□□□ -0.57
DDX55-204ENST00000536079 ERASQ7Z444 233 aa11.5□□□□□ -0.57
DDX55-204ENST00000536079 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
DDX55-204ENST00000536079 NPSP0C0P6 89 aa11.49□□□□□ -0.57
DDX55-204ENST00000536079 MALP21145 153 aa11.49□□□□□ -0.57
DDX55-204ENST00000536079 G0S2P27469 103 aa11.48□□□□□ -0.57
DDX55-204ENST00000536079 Q6ZN92 141 aa11.48□□□□□ -0.57
DDX55-204ENST00000536079 PCLOQ9Y6V0 5065 aa11.47□□□□□ -0.57
DDX55-204ENST00000536079 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
DDX55-204ENST00000536079 SMR3BP02814 79 aaPredicted RBP11.47□□□□□ -0.57
DDX55-204ENST00000536079 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
DDX55-204ENST00000536079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
DDX55-204ENST00000536079 FAM19A3Q7Z5A8 133 aa11.46□□□□□ -0.57
DDX55-204ENST00000536079 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
DDX55-204ENST00000536079 A0A0J9YXV3 536 aa11.45□□□□□ -0.58
DDX55-204ENST00000536079 PDZD11Q5EBL8 140 aa11.45□□□□□ -0.58
DDX55-204ENST00000536079 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
DDX55-204ENST00000536079 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
DDX55-204ENST00000536079 A0A087WZ39 114 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 ZNF561-AS1K7EIQ3 104 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 CHTF8P0CG12 524 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 LINC00310P59036 64 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 Q8N1X5 172 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 ORAOV1Q8WV07 137 aa11.44□□□□□ -0.58
DDX55-204ENST00000536079 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.43□□□□□ -0.58
DDX55-204ENST00000536079 HBDP02042 147 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 RAB5BP61020 215 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 Q6ZRU5 148 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
DDX55-204ENST00000536079 VPS13BQ7Z7G8 4022 aa11.42□□□□□ -0.58
DDX55-204ENST00000536079 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
DDX55-204ENST00000536079 KIAA0087Q14695 138 aa11.42□□□□□ -0.58
DDX55-204ENST00000536079 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
DDX55-204ENST00000536079 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
DDX55-204ENST00000536079 APOMO95445 188 aa11.41□□□□□ -0.58
DDX55-204ENST00000536079 PMVKQ15126 192 aa11.41□□□□□ -0.58
DDX55-204ENST00000536079 C10orf25Q5T742 122 aa11.41□□□□□ -0.58
DDX55-204ENST00000536079 CHCHD1Q96BP2 118 aaKnown RBP11.41□□□□□ -0.58
DDX55-204ENST00000536079 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
DDX55-204ENST00000536079 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
DDX55-204ENST00000536079 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
DDX55-204ENST00000536079 NUPR1O60356 82 aa11.4□□□□□ -0.58
DDX55-204ENST00000536079 BAGE3Q86Y29 109 aa11.4□□□□□ -0.58
DDX55-204ENST00000536079 OR10D4PQ8NGN7 298 aa11.4□□□□□ -0.58
DDX55-204ENST00000536079 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
DDX55-204ENST00000536079 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
DDX55-204ENST00000536079 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
DDX55-204ENST00000536079 CAMK2N2Q96S95 79 aa11.39□□□□□ -0.59
DDX55-204ENST00000536079 SERF1AO75920 110 aa11.38□□□□□ -0.59
DDX55-204ENST00000536079 A0A096LNI7 61 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 TINCRA0A1B0GVN0 87 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 NDUFA6P56556 154 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 HERVK_113P63121 156 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
DDX55-204ENST00000536079 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
DDX55-204ENST00000536079 IGLV5-45A0A087WSX0 123 aa11.36□□□□□ -0.59
DDX55-204ENST00000536079 Q5VSD8 79 aa11.36□□□□□ -0.59
DDX55-204ENST00000536079 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
DDX55-204ENST00000536079 SEC11AP67812 179 aa11.35□□□□□ -0.59
DDX55-204ENST00000536079 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
DDX55-204ENST00000536079 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
DDX55-204ENST00000536079 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
DDX55-204ENST00000536079 ATP6V1G1O75348 118 aa11.34□□□□□ -0.59
DDX55-204ENST00000536079 HSBP1O75506 76 aa11.34□□□□□ -0.59
DDX55-204ENST00000536079 ATP5LO75964 103 aa11.34□□□□□ -0.59
DDX55-204ENST00000536079 IGLC3P0DOY3 106 aa11.34□□□□□ -0.59
DDX55-204ENST00000536079 A0A087WYN8 130 aa11.33□□□□□ -0.6
DDX55-204ENST00000536079 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.6
DDX55-204ENST00000536079 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
DDX55-204ENST00000536079 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
DDX55-204ENST00000536079 NDUFA1O15239 70 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 SPINK8P0C7L1 97 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 MAJINQ3KP22 176 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
DDX55-204ENST00000536079 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms