RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 STPG4Q8N801 248 aa12.94□□□□□ -0.34
LTBR-205ENST00000535739 Q8N8P6 123 aa12.94□□□□□ -0.34
LTBR-205ENST00000535739 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
LTBR-205ENST00000535739 KIR2DL4Q99706 377 aa12.93□□□□□ -0.34
LTBR-205ENST00000535739 NXT2Q9NPJ8 142 aaKnown RBP12.93□□□□□ -0.34
LTBR-205ENST00000535739 A0A096LNI7 61 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BKO60814 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BJP06899 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BOP23527 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BBP33778 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 XCL1P47992 114 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BDP58876 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BCP62807 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST2H2BEQ16778 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.92□□□□□ -0.34
LTBR-205ENST00000535739 OR5A1Q8NGJ0 315 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BHQ93079 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BNQ99877 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 HIST1H2BMQ99879 126 aa12.92□□□□□ -0.34
LTBR-205ENST00000535739 ZNF25P17030 456 aaPredicted RBP12.91□□□□□ -0.34
LTBR-205ENST00000535739 LINC00526Q96FQ7 95 aa12.91□□□□□ -0.34
LTBR-205ENST00000535739 TCAPO15273 167 aa12.9□□□□□ -0.34
LTBR-205ENST00000535739 TSHBP01222 138 aa12.9□□□□□ -0.34
LTBR-205ENST00000535739 FCER1GP30273 86 aa12.9□□□□□ -0.34
LTBR-205ENST00000535739 PRR3P79522 188 aaKnown RBP12.9□□□□□ -0.34
LTBR-205ENST00000535739 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
LTBR-205ENST00000535739 LRP2P98164 4655 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 LINC00959A0A1B0GUT2 108 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 CCL25O15444 150 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 LINC00614P0C842 121 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 RAB5BP61020 215 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 FA2HQ7L5A8 372 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
LTBR-205ENST00000535739 ESDP10768 282 aa12.88□□□□□ -0.35
LTBR-205ENST00000535739 LINC01546A6NGU7 62 aa12.87□□□□□ -0.35
LTBR-205ENST00000535739 K7EMI3 77 aa12.87□□□□□ -0.35
LTBR-205ENST00000535739 URB1-AS1Q96HZ7 61 aa12.87□□□□□ -0.35
LTBR-205ENST00000535739 IGHV1-58A0A0C4DH39 117 aa12.86□□□□□ -0.35
LTBR-205ENST00000535739 LINC01600Q96MT4 127 aa12.86□□□□□ -0.35
LTBR-205ENST00000535739 ODF1Q14990 250 aa12.85□□□□□ -0.35
LTBR-205ENST00000535739 ORMDL2Q53FV1 153 aa12.85□□□□□ -0.35
LTBR-205ENST00000535739 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
LTBR-205ENST00000535739 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
LTBR-205ENST00000535739 SS18Q15532 418 aa12.84□□□□□ -0.35
LTBR-205ENST00000535739 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
LTBR-205ENST00000535739 LINC00474Q9P2X8 69 aa12.84□□□□□ -0.35
LTBR-205ENST00000535739 NDUFA6P56556 154 aa12.83□□□□□ -0.36
LTBR-205ENST00000535739 SERF1AO75920 110 aa12.82□□□□□ -0.36
LTBR-205ENST00000535739 CD164L2Q6UWJ8 174 aa12.82□□□□□ -0.36
LTBR-205ENST00000535739 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
LTBR-205ENST00000535739 ZNF664Q8N3J9 261 aa12.82□□□□□ -0.36
LTBR-205ENST00000535739 ZNF561-AS1K7EIQ3 104 aa12.81□□□□□ -0.36
LTBR-205ENST00000535739 G0S2P27469 103 aa12.81□□□□□ -0.36
LTBR-205ENST00000535739 LINC00310P59036 64 aa12.81□□□□□ -0.36
LTBR-205ENST00000535739 SYCNQ0VAF6 134 aa12.81□□□□□ -0.36
LTBR-205ENST00000535739 COA6Q5JTJ3 125 aaKnown RBP12.81□□□□□ -0.36
LTBR-205ENST00000535739 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
LTBR-205ENST00000535739 NUPR1O60356 82 aa12.8□□□□□ -0.36
LTBR-205ENST00000535739 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
LTBR-205ENST00000535739 HSBP1O75506 76 aa12.79□□□□□ -0.36
LTBR-205ENST00000535739 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
LTBR-205ENST00000535739 A0A0J9YXV3 536 aa12.78□□□□□ -0.36
LTBR-205ENST00000535739 PTTG1IPP53801 180 aa12.77□□□□□ -0.37
LTBR-205ENST00000535739 RPL39P62891 51 aaKnown RBP12.77□□□□□ -0.37
LTBR-205ENST00000535739 PMCHL1Q16048 86 aa12.77□□□□□ -0.37
LTBR-205ENST00000535739 C2orf66Q6UXQ4 117 aa12.77□□□□□ -0.37
LTBR-205ENST00000535739 CYSLTR1Q9Y271 337 aa12.77□□□□□ -0.37
LTBR-205ENST00000535739 IGLV4-69A0A075B6H9 119 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 S100A6P06703 90 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 KRTAP10-8P60410 259 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 SRSF9Q13242 221 aaKnown RBP eCLIP12.76□□□□□ -0.37
LTBR-205ENST00000535739 RNASE13Q5GAN3 156 aaKnown RBP12.76□□□□□ -0.37
LTBR-205ENST00000535739 REG3GQ6UW15 175 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 Q6ZRP5 223 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
LTBR-205ENST00000535739 A0A096LNJ9 63 aa12.75□□□□□ -0.37
LTBR-205ENST00000535739 HBDP02042 147 aa12.75□□□□□ -0.37
LTBR-205ENST00000535739 MALP21145 153 aa12.75□□□□□ -0.37
LTBR-205ENST00000535739 SMAGPQ0VAQ4 97 aa12.75□□□□□ -0.37
LTBR-205ENST00000535739 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
LTBR-205ENST00000535739 LOC107984640A0A0U1RRK4 108 aa12.74□□□□□ -0.37
LTBR-205ENST00000535739 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
LTBR-205ENST00000535739 COX7A2LO14548 114 aa12.74□□□□□ -0.37
LTBR-205ENST00000535739 UBE2D4Q9Y2X8 147 aa12.74□□□□□ -0.37
LTBR-205ENST00000535739 RNF213Q63HN8 5207 aa12.73□□□□□ -0.37
LTBR-205ENST00000535739 TIMM21Q9BVV7 248 aa12.73□□□□□ -0.37
LTBR-205ENST00000535739 TMA7Q9Y2S6 64 aaKnown RBP12.73□□□□□ -0.37
LTBR-205ENST00000535739 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 A0A1W2PNN7 141 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 CAMK2N2Q96S95 79 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 PYGO1Q9Y3Y4 419 aa12.72□□□□□ -0.37
LTBR-205ENST00000535739 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
LTBR-205ENST00000535739 IGIPA6NJ69 53 aa12.71□□□□□ -0.37
LTBR-205ENST00000535739 PDZD11Q5EBL8 140 aa12.71□□□□□ -0.37
LTBR-205ENST00000535739 ERASQ7Z444 233 aa12.71□□□□□ -0.37
LTBR-205ENST00000535739 C5orf38Q86SI9 138 aa12.71□□□□□ -0.37
LTBR-205ENST00000535739 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms