RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 CLPSL2Q6UWE3 100 aa12.79□□□□□ -0.36
HTATSF1-204ENST00000535601 TRAV26-1A0A087WT03 109 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 HERV-K104P63124 156 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 ZNF625Q96I27 306 aaPredicted RBP12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 TINCRA0A1B0GVN0 87 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 APOMO95445 188 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 Q8NAQ8 132 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 DNAH3Q8TD57 4116 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 A0A0U1RRA0 63 aa12.78□□□□□ -0.36
HTATSF1-204ENST00000535601 DAND5Q8N907 189 aa12.77□□□□□ -0.37
HTATSF1-204ENST00000535601 TRBV6-8A0A0A6YYG3 113 aa12.76□□□□□ -0.37
HTATSF1-204ENST00000535601 DAD1P61803 113 aa12.76□□□□□ -0.37
HTATSF1-204ENST00000535601 LINC00612Q8N6U2 182 aa12.76□□□□□ -0.37
HTATSF1-204ENST00000535601 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 PAX4O43316 350 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 VSIG2Q96IQ7 327 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 SPANXB1Q9NS25 103 aaPredicted RBP12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 IGHV1-58A0A0C4DH39 117 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 F5H768 121 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 ATP6V0E2Q8NHE4 81 aa12.75□□□□□ -0.37
HTATSF1-204ENST00000535601 TMEM101Q96IK0 257 aa12.74□□□□□ -0.37
HTATSF1-204ENST00000535601 SIGMAR1Q99720 223 aa12.74□□□□□ -0.37
HTATSF1-204ENST00000535601 F8W1H4 67 aa12.74□□□□□ -0.37
HTATSF1-204ENST00000535601 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
HTATSF1-204ENST00000535601 A0A0J9YXY3 114 aa12.73□□□□□ -0.37
HTATSF1-204ENST00000535601 GAGE12HA6NDE8 117 aa12.73□□□□□ -0.37
HTATSF1-204ENST00000535601 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
HTATSF1-204ENST00000535601 PRO0255Q9UI72 69 aa12.73□□□□□ -0.37
HTATSF1-204ENST00000535601 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
HTATSF1-204ENST00000535601 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
HTATSF1-204ENST00000535601 RNF183Q96D59 192 aa12.72□□□□□ -0.37
HTATSF1-204ENST00000535601 J3QR89 54 aa12.72□□□□□ -0.37
HTATSF1-204ENST00000535601 TAL2Q16559 108 aa12.72□□□□□ -0.37
HTATSF1-204ENST00000535601 EIF4EBP3O60516 100 aaPredicted RBP12.71□□□□□ -0.37
HTATSF1-204ENST00000535601 PRSS2P07478 247 aa12.71□□□□□ -0.37
HTATSF1-204ENST00000535601 A0A1B0GWB2 263 aa12.71□□□□□ -0.38
HTATSF1-204ENST00000535601 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.38
HTATSF1-204ENST00000535601 WIPF1O43516 503 aa12.7□□□□□ -0.38
HTATSF1-204ENST00000535601 LYRM9A8MSI8 78 aa12.7□□□□□ -0.38
HTATSF1-204ENST00000535601 MUSTN1Q8IVN3 82 aa12.7□□□□□ -0.38
HTATSF1-204ENST00000535601 LOC107984156A0A0G2JMH3 177 aa12.69□□□□□ -0.38
HTATSF1-204ENST00000535601 H7C2G1 150 aa12.69□□□□□ -0.38
HTATSF1-204ENST00000535601 ARL17AQ8IVW1 177 aa12.69□□□□□ -0.38
HTATSF1-204ENST00000535601 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
HTATSF1-204ENST00000535601 CSDC2Q9Y534 153 aaKnown RBP12.68□□□□□ -0.38
HTATSF1-204ENST00000535601 COL7A1Q02388 2944 aa12.68□□□□□ -0.38
HTATSF1-204ENST00000535601 MIFP14174 115 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 HERVK_113P63121 156 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 TOMM7Q9P0U1 55 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 TIRAPP58753 221 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 Q9H8V8 135 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 CFC1BP0CG36 223 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 CFC1P0CG37 223 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 C5orf38Q86SI9 138 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 LITAFQ99732 161 aa12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 C11orf68Q9H3H3 251 aaKnown RBP12.67□□□□□ -0.38
HTATSF1-204ENST00000535601 ATP5G1P05496 136 aa12.66□□□□□ -0.38
HTATSF1-204ENST00000535601 IGLV5-45A0A087WSX0 123 aa12.66□□□□□ -0.38
HTATSF1-204ENST00000535601 SPART-AS1P0CW21 52 aa12.66□□□□□ -0.38
HTATSF1-204ENST00000535601 PSMB2P49721 201 aa12.65□□□□□ -0.38
HTATSF1-204ENST00000535601 IGLV10-54A0A075B6I4 117 aa12.64□□□□□ -0.39
HTATSF1-204ENST00000535601 XCL1P47992 114 aa12.64□□□□□ -0.39
HTATSF1-204ENST00000535601 A0A1B0GV72 72 aa12.64□□□□□ -0.39
HTATSF1-204ENST00000535601 ZFAND6Q6FIF0 208 aa12.64□□□□□ -0.39
HTATSF1-204ENST00000535601 PRO0461Q9UI25 63 aa12.64□□□□□ -0.39
HTATSF1-204ENST00000535601 STAB2Q8WWQ8 2551 aa12.63□□□□□ -0.39
HTATSF1-204ENST00000535601 TSPAN13O95857 204 aa12.63□□□□□ -0.39
HTATSF1-204ENST00000535601 MRAPQ8TCY5 172 aa12.62□□□□□ -0.39
HTATSF1-204ENST00000535601 SS18L2Q9UHA2 77 aa12.62□□□□□ -0.39
HTATSF1-204ENST00000535601 IGLV5-39A0A0G2JS06 123 aa12.61□□□□□ -0.39
HTATSF1-204ENST00000535601 EGFEM1PQ0D2K5 195 aa12.61□□□□□ -0.39
HTATSF1-204ENST00000535601 Q6ZTC4 211 aa12.61□□□□□ -0.39
HTATSF1-204ENST00000535601 LINC00269Q8N2A0 174 aa12.61□□□□□ -0.39
HTATSF1-204ENST00000535601 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
HTATSF1-204ENST00000535601 SPATA25Q9BR10 227 aa12.59□□□□□ -0.39
HTATSF1-204ENST00000535601 A0A0J9YWU9 116 aa12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 ANGP03950 147 aaKnown RBP12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 LYSTQ99698 3801 aa12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 NDUFA1O15239 70 aa12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 SMCPP49901 116 aaPredicted RBP12.58□□□□□ -0.4
HTATSF1-204ENST00000535601 H7C423 109 aa12.57□□□□□ -0.4
HTATSF1-204ENST00000535601 NANOS2P60321 138 aaKnown RBP12.57□□□□□ -0.4
HTATSF1-204ENST00000535601 FOXI1Q12951 378 aa12.57□□□□□ -0.4
HTATSF1-204ENST00000535601 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
HTATSF1-204ENST00000535601 IGHV3OR16-9A0A0B4J2B5 98 aa12.56□□□□□ -0.4
HTATSF1-204ENST00000535601 SCGB1A1P11684 91 aa12.56□□□□□ -0.4
HTATSF1-204ENST00000535601 FAM19A3Q7Z5A8 133 aa12.56□□□□□ -0.4
HTATSF1-204ENST00000535601 TENM2Q9NT68 2774 aa12.56□□□□□ -0.4
HTATSF1-204ENST00000535601 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
HTATSF1-204ENST00000535601 MIAQ16674 131 aa12.55□□□□□ -0.4
HTATSF1-204ENST00000535601 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
HTATSF1-204ENST00000535601 PRO1854Q9UHT4 67 aa12.54□□□□□ -0.4
HTATSF1-204ENST00000535601 CKS1BP61024 79 aa12.54□□□□□ -0.4
HTATSF1-204ENST00000535601 Q1RN00 199 aa12.54□□□□□ -0.4
HTATSF1-204ENST00000535601 SOSTDC1Q6X4U4 206 aa12.54□□□□□ -0.4
HTATSF1-204ENST00000535601 COX7B2Q8TF08 81 aa12.53□□□□□ -0.4
HTATSF1-204ENST00000535601 IGHV3-33P01772 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms