RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ATP5G1P05496 136 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 LINC01356Q8N9X3 169 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
HDAC4-214ENST00000535493 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 LINC00337Q8N6G1 96 aa9.54□□□□□ -0.88
HDAC4-214ENST00000535493 F5H768 121 aa9.53□□□□□ -0.88
HDAC4-214ENST00000535493 MIR7-3HGQ8N6C7 128 aa9.53□□□□□ -0.88
HDAC4-214ENST00000535493 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
HDAC4-214ENST00000535493 CDC42SE2Q9NRR3 84 aa9.53□□□□□ -0.88
HDAC4-214ENST00000535493 ODF3L2Q3SX64 289 aa9.53□□□□□ -0.88
HDAC4-214ENST00000535493 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
HDAC4-214ENST00000535493 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
HDAC4-214ENST00000535493 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
HDAC4-214ENST00000535493 ITPR3Q14573 2671 aa9.52□□□□□ -0.89
HDAC4-214ENST00000535493 FLNAP21333 2647 aaKnown RBP9.52□□□□□ -0.89
HDAC4-214ENST00000535493 A0A087WYN8 130 aa9.52□□□□□ -0.89
HDAC4-214ENST00000535493 RPL36AP83881 106 aaKnown RBP9.52□□□□□ -0.89
HDAC4-214ENST00000535493 RPL36ALQ969Q0 106 aaKnown RBP9.52□□□□□ -0.89
HDAC4-214ENST00000535493 WFDC10AQ9H1F0 79 aa9.52□□□□□ -0.89
HDAC4-214ENST00000535493 PFN2P35080 140 aa9.51□□□□□ -0.89
HDAC4-214ENST00000535493 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
HDAC4-214ENST00000535493 STHQ8IWL8 128 aa9.51□□□□□ -0.89
HDAC4-214ENST00000535493 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 SLPIP03973 132 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 Q6YL49 198 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 C14orf132Q9NPU4 83 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 A8MTW9 85 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 K7EQD1 137 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 LINC00158P58513 81 aa9.5□□□□□ -0.89
HDAC4-214ENST00000535493 UBE2L6O14933 153 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 C9orf153Q5TBE3 101 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 HIST2H2BCQ6DN03 193 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 PPDPFQ9H3Y8 114 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 SND1-IT1Q9HBX3 110 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
HDAC4-214ENST00000535493 IGKV3D-7A0A0C4DH55 119 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 CRPP02741 224 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 MALP21145 153 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 C5orf38Q86SI9 138 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 LINC00643Q86TS7 51 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 PRORYQ9H606 182 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 CR1P17927 2039 aa9.48□□□□□ -0.89
HDAC4-214ENST00000535493 IGLV4-60A0A075B6I1 120 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 TRACP01848 142 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 SMIM11BQ8TCY0 68 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 TRGV2A0A075B6R0 118 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 LOC107984640A0A0U1RRK4 108 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 A0A096LNT2 108 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 ACYP1P07311 99 aa9.47□□□□□ -0.89
HDAC4-214ENST00000535493 A0A087WVE0 104 aa9.46□□□□□ -0.89
HDAC4-214ENST00000535493 OR13C6PQ8NH95 151 aa9.46□□□□□ -0.89
HDAC4-214ENST00000535493 NCR3O14931 201 aa9.46□□□□□ -0.9
HDAC4-214ENST00000535493 RPL35AP18077 110 aaKnown RBP9.46□□□□□ -0.9
HDAC4-214ENST00000535493 KRTAP10-9P60411 292 aa9.46□□□□□ -0.9
HDAC4-214ENST00000535493 VWFP04275 2813 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 DNAL4O96015 105 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 LECT2O14960 151 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 CCL18P55774 89 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 HIVEP2P31629 2446 aa9.45□□□□□ -0.9
HDAC4-214ENST00000535493 C3orf22Q8N5N4 141 aa9.44□□□□□ -0.9
HDAC4-214ENST00000535493 PAX4O43316 350 aa9.43□□□□□ -0.9
HDAC4-214ENST00000535493 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
HDAC4-214ENST00000535493 CLPSL2Q6UWE3 100 aa9.43□□□□□ -0.9
HDAC4-214ENST00000535493 C4orf3Q8WVX3 66 aa9.43□□□□□ -0.9
HDAC4-214ENST00000535493 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
HDAC4-214ENST00000535493 IGHV4-31P0DP07 118 aa9.43□□□□□ -0.9
HDAC4-214ENST00000535493 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
HDAC4-214ENST00000535493 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
HDAC4-214ENST00000535493 PRB1P04280 392 aa9.42□□□□□ -0.9
HDAC4-214ENST00000535493 COPS9Q8WXC6 57 aa9.42□□□□□ -0.9
HDAC4-214ENST00000535493 IMUPQ9GZP8 106 aa9.42□□□□□ -0.9
HDAC4-214ENST00000535493 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
HDAC4-214ENST00000535493 IL17DQ8TAD2 202 aa9.41□□□□□ -0.9
HDAC4-214ENST00000535493 A0A096LPF7 62 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 TRGV4A0A0C4DH28 118 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 TRBV10-1A0A0K0K1A3 114 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 hADV29S1A0JD25 119 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 GIG44P09565 113 aaPredicted RBP9.4□□□□□ -0.9
HDAC4-214ENST00000535493 INAFM2P0DMQ5 153 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
HDAC4-214ENST00000535493 UQCRQO14949 82 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 XCL1P47992 114 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 WFDC9Q8NEX5 89 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 J3QLI3 93 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 DSCR9P59020 149 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 LRRC75A-AS1Q8N1F1 130 aa9.39□□□□□ -0.91
HDAC4-214ENST00000535493 USP24Q9UPU5 2620 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
HDAC4-214ENST00000535493 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 FSHBP01225 129 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 DEFB130BP0DP73 79 aa9.38□□□□□ -0.91
HDAC4-214ENST00000535493 DEFB130AP0DP74 79 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms