RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 ZNF625Q96I27 306 aaPredicted RBP11.16□□□□□ -0.62
TPBG-202ENST00000535040 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
TPBG-202ENST00000535040 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
TPBG-202ENST00000535040 Q8N2B8 174 aa11.15□□□□□ -0.62
TPBG-202ENST00000535040 A0A0U1RRA0 63 aa11.15□□□□□ -0.62
TPBG-202ENST00000535040 NDUFA7O95182 113 aa11.14□□□□□ -0.63
TPBG-202ENST00000535040 KHDC1LQ5JSQ8 128 aa11.14□□□□□ -0.63
TPBG-202ENST00000535040 INSP01308 110 aa11.13□□□□□ -0.63
TPBG-202ENST00000535040 HIVEP1P15822 2718 aa11.12□□□□□ -0.63
TPBG-202ENST00000535040 CHCHD5Q9BSY4 110 aa11.12□□□□□ -0.63
TPBG-202ENST00000535040 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
TPBG-202ENST00000535040 C11orf44Q8N8P7 122 aa11.12□□□□□ -0.63
TPBG-202ENST00000535040 BAHCC1Q9P281 2608 aa11.11□□□□□ -0.63
TPBG-202ENST00000535040 F5H768 121 aa11.11□□□□□ -0.63
TPBG-202ENST00000535040 ACYP1P07311 99 aa11.11□□□□□ -0.63
TPBG-202ENST00000535040 SETXQ7Z333 2677 aaKnown RBP11.11□□□□□ -0.63
TPBG-202ENST00000535040 NTM-AS1Q6ZSK4 140 aa11.11□□□□□ -0.63
TPBG-202ENST00000535040 COPS9Q8WXC6 57 aa11.11□□□□□ -0.63
TPBG-202ENST00000535040 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
TPBG-202ENST00000535040 SMCR5Q8TEV8 140 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 C22orf24Q9Y442 160 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 PRIMA1Q86XR5 153 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 TMEM86BQ8N661 226 aa11.1□□□□□ -0.63
TPBG-202ENST00000535040 TRACP01848 142 aa11.09□□□□□ -0.63
TPBG-202ENST00000535040 MEIG1Q5JSS6 88 aa11.09□□□□□ -0.63
TPBG-202ENST00000535040 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
TPBG-202ENST00000535040 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
TPBG-202ENST00000535040 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
TPBG-202ENST00000535040 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
TPBG-202ENST00000535040 FAM218AQ96MZ4 157 aa11.08□□□□□ -0.64
TPBG-202ENST00000535040 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
TPBG-202ENST00000535040 DEFB114Q30KQ6 69 aa11.08□□□□□ -0.64
TPBG-202ENST00000535040 IMUPQ9GZP8 106 aa11.08□□□□□ -0.64
TPBG-202ENST00000535040 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
TPBG-202ENST00000535040 DYNLRB2Q8TF09 96 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 NIPBLQ6KC79 2804 aaeCLIP11.07□□□□□ -0.64
TPBG-202ENST00000535040 TRGV1A0A0A0MS02 117 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 SDIM1Q6ZPB5 146 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 BAALC-AS2P0C853 105 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 PPDPFQ9H3Y8 114 aa11.07□□□□□ -0.64
TPBG-202ENST00000535040 K7EQD1 137 aa11.06□□□□□ -0.64
TPBG-202ENST00000535040 HERV-K104P63124 156 aa11.06□□□□□ -0.64
TPBG-202ENST00000535040 C4orf3Q8WVX3 66 aa11.06□□□□□ -0.64
TPBG-202ENST00000535040 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
TPBG-202ENST00000535040 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
TPBG-202ENST00000535040 F8P00451 2351 aa11.06□□□□□ -0.64
TPBG-202ENST00000535040 FAM236AA0A1B0GUQ0 79 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 FAM236BA0A1B0GV22 79 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 A0A1W2PRX2 142 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 NSD1Q96L73 2696 aaPredicted RBP11.05□□□□□ -0.64
TPBG-202ENST00000535040 TRBV10-1A0A0K0K1A3 114 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 LINC00643Q86TS7 51 aa11.05□□□□□ -0.64
TPBG-202ENST00000535040 Q6ZTI0 123 aa11.04□□□□□ -0.64
TPBG-202ENST00000535040 HILS1P60008 231 aa11.03□□□□□ -0.64
TPBG-202ENST00000535040 RNASE1P07998 156 aaKnown RBP11.03□□□□□ -0.64
TPBG-202ENST00000535040 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
TPBG-202ENST00000535040 SMIM20Q8N5G0 67 aa11.03□□□□□ -0.64
TPBG-202ENST00000535040 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.64
TPBG-202ENST00000535040 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
TPBG-202ENST00000535040 STHQ8IWL8 128 aa11□□□□□ -0.65
TPBG-202ENST00000535040 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
TPBG-202ENST00000535040 LINC01006Q8NI28 216 aa11□□□□□ -0.65
TPBG-202ENST00000535040 Q9HAA7 133 aa11□□□□□ -0.65
TPBG-202ENST00000535040 PF4P02776 101 aa11□□□□□ -0.65
TPBG-202ENST00000535040 IGKV2-28A0A075B6P5 120 aa11□□□□□ -0.65
TPBG-202ENST00000535040 TRAV13-2A0A0B4J235 113 aa11□□□□□ -0.65
TPBG-202ENST00000535040 IGKV2D-28P01615 120 aa11□□□□□ -0.65
TPBG-202ENST00000535040 C3orf56Q8N813 242 aa11□□□□□ -0.65
TPBG-202ENST00000535040 MALP21145 153 aa10.99□□□□□ -0.65
TPBG-202ENST00000535040 TMEM243Q9BU79 118 aa10.99□□□□□ -0.65
TPBG-202ENST00000535040 CRPP02741 224 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 NBEAL2Q6ZNJ1 2754 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 MIR7-3HGQ8N6C7 128 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 TEP1Q99973 2627 aaKnown RBP10.98□□□□□ -0.65
TPBG-202ENST00000535040 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 C5orf38Q86SI9 138 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 COX7B2Q8TF08 81 aa10.98□□□□□ -0.65
TPBG-202ENST00000535040 UBE2L6O14933 153 aa10.97□□□□□ -0.65
TPBG-202ENST00000535040 TMEM126AQ9H061 195 aa10.97□□□□□ -0.65
TPBG-202ENST00000535040 CYSRT1A8MQ03 144 aa10.97□□□□□ -0.65
TPBG-202ENST00000535040 CXCL5P42830 114 aa10.96□□□□□ -0.65
TPBG-202ENST00000535040 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
TPBG-202ENST00000535040 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
TPBG-202ENST00000535040 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.65
TPBG-202ENST00000535040 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.66
TPBG-202ENST00000535040 A0A087WYN8 130 aa10.95□□□□□ -0.66
TPBG-202ENST00000535040 LOC100131303A0A0U1RQF7 123 aa10.95□□□□□ -0.66
TPBG-202ENST00000535040 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
TPBG-202ENST00000535040 SMIM11BQ8TCY0 68 aa10.95□□□□□ -0.66
TPBG-202ENST00000535040 C9orf129Q5T035 196 aaKnown RBP10.94□□□□□ -0.66
TPBG-202ENST00000535040 PLAC8L1A1L4L8 177 aa10.94□□□□□ -0.66
TPBG-202ENST00000535040 ATP5G1P05496 136 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms