RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FXYD3Q14802 87 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 RBMY1FQ15415 496 aaKnown RBP2.19□□□□□ -2.06
USP48-215ENST00000534705 C1orf195Q5TG92 126 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 MIC13Q5XKP0 118 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 SCGB1D4Q6XE38 83 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 Q6ZQT7 251 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 LINC00596Q86U02 117 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 Q8N2B8 174 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 Q8N9L7 120 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 IFI27L1Q96BM0 104 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 DPH3Q96FX2 82 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 TRGV9Q99603 122 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 UPK3BQ9BT76 320 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 TMEM243Q9BU79 118 aa2.19□□□□□ -2.06
USP48-215ENST00000534705 NHP2Q9NX24 153 aaKnown RBP2.19□□□□□ -2.06
USP48-215ENST00000534705 IGHV6-1A0A0B4J1U7 121 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 CLPSL1A2RUU4 121 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 A8MWV9 139 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 KRTAP4-16G5E9R7 235 aaPredicted RBP2.18□□□□□ -2.06
USP48-215ENST00000534705 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 LGALS9O00182 355 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 SPINK4O60575 86 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 SNCGO76070 127 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 HBDP02042 147 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 P0DMU3 169 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 FAM231AP0DMU4 169 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 FAM231CP0DMU5 169 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 COX7CP15954 63 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 PSMB8P28062 276 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 CXCL5P42830 114 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 TMEM258P61165 79 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 DAD1P61803 113 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 REG3AQ06141 175 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 ERCC8Q13216 396 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 LY6EQ16553 131 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 MINOS1Q5TGZ0 78 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 LYRM7Q5U5X0 104 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 C5orf38Q86SI9 138 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 LINC00311Q8N616 119 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 ANKRD29Q8N6D5 301 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 Q8N6K4 173 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 C15orf53Q8NAA6 179 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 NPBQ8NG41 125 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 OR1L8Q8NGR8 309 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 UBALD1Q8TB05 177 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
USP48-215ENST00000534705 LEAP2Q969E1 77 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 FMC1Q96HJ9 113 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 CAMK2N2Q96S95 79 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 TIMM17AQ99595 171 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 RPP21Q9H633 154 aaKnown RBP2.18□□□□□ -2.06
USP48-215ENST00000534705 ZNF355PQ9NSJ1 428 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 AMMECR1Q9Y4X0 333 aaPredicted RBP2.18□□□□□ -2.06
USP48-215ENST00000534705 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
USP48-215ENST00000534705 NACAE9PAV3 2078 aa2.18□□□□□ -2.06
USP48-215ENST00000534705 STARD9Q9P2P6 4700 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 IGLV2-18A0A075B6J9 118 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 TRAV8-3A0A0A6YYJ7 113 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 LOC389332A0A1B0GUA5 103 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 INS-IGF2F8WCM5 200 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 TCL1BO95988 128 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 LGALS1P09382 135 aaKnown RBP2.17□□□□□ -2.06
USP48-215ENST00000534705 CD24P25063 80 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 ZNF137PP52743 207 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 BLCAPP62952 87 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 ZNF816Q0VGE8 651 aaPredicted RBP2.17□□□□□ -2.06
USP48-215ENST00000534705 C10orf99Q6UWK7 81 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 LINC00322Q6ZN03 302 aaPredicted RBP2.17□□□□□ -2.06
USP48-215ENST00000534705 MIR17HGQ75NE6 70 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 DRAM1Q8N682 238 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 C3orf56Q8N813 242 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 PLEKHB2Q96CS7 222 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 LYSTQ99698 3801 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 AGPAT4-IT1Q9H0P7 198 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 PRNDQ9UKY0 176 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 CSMD3Q7Z407 3707 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 SACSQ9NZJ4 4579 aa2.17□□□□□ -2.06
USP48-215ENST00000534705 DYNC2H1Q8NCM8 4307 aaKnown RBP2.16□□□□□ -2.06
USP48-215ENST00000534705 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
USP48-215ENST00000534705 TRAV12-1A0A0B4J245 112 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 IGHV1-3A0A0C4DH29 117 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 A0A1B0GUT8 65 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 TMEM30CPA0ZSE6 113 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 RBAKDNA6NC62 111 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 OOSP1A8MZH6 123 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 NDUFC2-KCTD14E9PQ53 114 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 SLC25A20O43772 301 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 IL4P05112 153 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 ACYP1P07311 99 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 SCGB1C2P0DMR2 95 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 MGST1P10620 155 aaKnown RBP2.16□□□□□ -2.06
USP48-215ENST00000534705 FCER1GP30273 86 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 IFI27P40305 119 aaPredicted RBP2.16□□□□□ -2.06
USP48-215ENST00000534705 UBE2AP49459 152 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 TMEM170BQ5T4T1 132 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 FAM104BQ5XKR9 115 aa2.16□□□□□ -2.06
USP48-215ENST00000534705 ZFP2Q6ZN57 461 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms