RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 TMEM141Q96I45 108 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 C2orf88Q9BSF0 95 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
UBXN1-217ENST00000534176 A0A087WYN8 130 aa9.85□□□□□ -0.83
UBXN1-217ENST00000534176 TGIF2-C20orf24A0A0A6YYL0 155 aa9.85□□□□□ -0.83
UBXN1-217ENST00000534176 MT-ND6P03923 174 aa9.85□□□□□ -0.83
UBXN1-217ENST00000534176 TEX43Q6ZNM6 134 aa9.85□□□□□ -0.83
UBXN1-217ENST00000534176 GNB1LQ9BYB4 327 aa9.85□□□□□ -0.83
UBXN1-217ENST00000534176 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
UBXN1-217ENST00000534176 RNASE13Q5GAN3 156 aaKnown RBP9.84□□□□□ -0.83
UBXN1-217ENST00000534176 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
UBXN1-217ENST00000534176 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
UBXN1-217ENST00000534176 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 SEC11AP67812 179 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 RNF151Q2KHN1 245 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 C10orf91Q5T1B1 145 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 C2orf66Q6UXQ4 117 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
UBXN1-217ENST00000534176 CARHSP1Q9Y2V2 147 aaKnown RBP9.83□□□□□ -0.84
UBXN1-217ENST00000534176 KRTAP29-1A8MX34 341 aaPredicted RBP9.82□□□□□ -0.84
UBXN1-217ENST00000534176 PANO1I0J062 215 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 J3QL48 77 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 OXTP01178 125 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 C5orf38Q86SI9 138 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 LINC01561Q8N1V8 128 aa9.82□□□□□ -0.84
UBXN1-217ENST00000534176 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
UBXN1-217ENST00000534176 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
UBXN1-217ENST00000534176 KRTAP10-4P60372 401 aaPredicted RBP9.81□□□□□ -0.84
UBXN1-217ENST00000534176 SPAG11BQ08648 103 aa9.81□□□□□ -0.84
UBXN1-217ENST00000534176 NDUFA5Q16718 116 aa9.81□□□□□ -0.84
UBXN1-217ENST00000534176 VCX2Q9H322 139 aa9.81□□□□□ -0.84
UBXN1-217ENST00000534176 A0A087WZ39 114 aa9.8□□□□□ -0.84
UBXN1-217ENST00000534176 CHTF8P0CG12 524 aa9.8□□□□□ -0.84
UBXN1-217ENST00000534176 STPG4Q8N801 248 aa9.8□□□□□ -0.84
UBXN1-217ENST00000534176 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
UBXN1-217ENST00000534176 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
UBXN1-217ENST00000534176 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
UBXN1-217ENST00000534176 FLG2Q5D862 2391 aaPredicted RBP9.8□□□□□ -0.84
UBXN1-217ENST00000534176 A0A096LNI7 61 aa9.79□□□□□ -0.84
UBXN1-217ENST00000534176 NDUFA1O15239 70 aa9.79□□□□□ -0.84
UBXN1-217ENST00000534176 ORAOV1Q8WV07 137 aa9.79□□□□□ -0.84
UBXN1-217ENST00000534176 PTTG1IPP53801 180 aa9.78□□□□□ -0.84
UBXN1-217ENST00000534176 Q6ZRU5 148 aa9.78□□□□□ -0.84
UBXN1-217ENST00000534176 AMELXQ99217 191 aa9.78□□□□□ -0.84
UBXN1-217ENST00000534176 OPRPNQ99935 248 aaPredicted RBP9.78□□□□□ -0.84
UBXN1-217ENST00000534176 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
UBXN1-217ENST00000534176 UBE2D1P51668 147 aa9.77□□□□□ -0.85
UBXN1-217ENST00000534176 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.85
UBXN1-217ENST00000534176 FAM19A3Q7Z5A8 133 aa9.77□□□□□ -0.85
UBXN1-217ENST00000534176 TOMM6Q96B49 74 aa9.77□□□□□ -0.85
UBXN1-217ENST00000534176 LINC00526Q96FQ7 95 aa9.77□□□□□ -0.85
UBXN1-217ENST00000534176 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
UBXN1-217ENST00000534176 SNAPINO95295 136 aa9.76□□□□□ -0.85
UBXN1-217ENST00000534176 HERVK_113P63121 156 aa9.76□□□□□ -0.85
UBXN1-217ENST00000534176 ERASQ7Z444 233 aa9.76□□□□□ -0.85
UBXN1-217ENST00000534176 SVBPQ8N300 66 aa9.76□□□□□ -0.85
UBXN1-217ENST00000534176 LINC01546A6NGU7 62 aa9.75□□□□□ -0.85
UBXN1-217ENST00000534176 ALKBH7Q9BT30 221 aaPredicted RBP9.75□□□□□ -0.85
UBXN1-217ENST00000534176 MYCBP2O75592 4640 aa9.75□□□□□ -0.85
UBXN1-217ENST00000534176 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
UBXN1-217ENST00000534176 TLX1NBP0CAT3 122 aa9.74□□□□□ -0.85
UBXN1-217ENST00000534176 KIAA1644Q3SXP7 199 aa9.74□□□□□ -0.85
UBXN1-217ENST00000534176 SMCO4Q9NRQ5 59 aa9.74□□□□□ -0.85
UBXN1-217ENST00000534176 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
UBXN1-217ENST00000534176 FABP9Q0Z7S8 132 aa9.73□□□□□ -0.85
UBXN1-217ENST00000534176 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
UBXN1-217ENST00000534176 MRPL18Q9H0U6 180 aaKnown RBP9.73□□□□□ -0.85
UBXN1-217ENST00000534176 PRSS2P07478 247 aa9.72□□□□□ -0.85
UBXN1-217ENST00000534176 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
UBXN1-217ENST00000534176 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
UBXN1-217ENST00000534176 PACRGQ96M98 296 aaPredicted RBP9.72□□□□□ -0.85
UBXN1-217ENST00000534176 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
UBXN1-217ENST00000534176 GEMIN7Q9H840 131 aaKnown RBP9.72□□□□□ -0.85
UBXN1-217ENST00000534176 APOC3P02656 99 aa9.71□□□□□ -0.86
UBXN1-217ENST00000534176 Q6ZRP5 223 aa9.71□□□□□ -0.86
UBXN1-217ENST00000534176 LINC00173Q6ZV60 143 aa9.71□□□□□ -0.86
UBXN1-217ENST00000534176 Q8IZM0 81 aa9.7□□□□□ -0.86
UBXN1-217ENST00000534176 CXCL5P42830 114 aa9.69□□□□□ -0.86
UBXN1-217ENST00000534176 RAB5BP61020 215 aa9.69□□□□□ -0.86
UBXN1-217ENST00000534176 CKS1BP61024 79 aa9.69□□□□□ -0.86
UBXN1-217ENST00000534176 PRR3P79522 188 aaKnown RBP9.69□□□□□ -0.86
UBXN1-217ENST00000534176 KIAA0087Q14695 138 aa9.69□□□□□ -0.86
UBXN1-217ENST00000534176 TRAPPC1Q9Y5R8 145 aa9.69□□□□□ -0.86
UBXN1-217ENST00000534176 C6orf226Q5I0X4 101 aa9.68□□□□□ -0.86
UBXN1-217ENST00000534176 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
UBXN1-217ENST00000534176 NDUFC2-KCTD14E9PQ53 114 aa9.67□□□□□ -0.86
UBXN1-217ENST00000534176 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
UBXN1-217ENST00000534176 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
UBXN1-217ENST00000534176 UNQ6190/PRO20217Q6UXQ8 127 aa9.67□□□□□ -0.86
UBXN1-217ENST00000534176 PMVKQ15126 192 aa9.66□□□□□ -0.86
UBXN1-217ENST00000534176 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
UBXN1-217ENST00000534176 C6orf48Q9UBA6 75 aa9.66□□□□□ -0.86
UBXN1-217ENST00000534176 LINC00614P0C842 121 aa9.65□□□□□ -0.86
UBXN1-217ENST00000534176 ODF1Q14990 250 aa9.65□□□□□ -0.86
UBXN1-217ENST00000534176 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 H3BRM9 83 aa9.64□□□□□ -0.87
UBXN1-217ENST00000534176 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
UBXN1-217ENST00000534176 PDZD11Q5EBL8 140 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms