RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 TRBV6-5A0A0K0K1A5 114 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 NDUFA1O15239 70 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 LINC00299Q6ZSB3 139 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 KRTAP7-1Q8IUC3 87 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 RPL39LQ96EH5 51 aaKnown RBP5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 SMIM12Q96EX1 92 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 CYTL1Q9NRR1 136 aa5.36□□□□□ -1.55
SOX9-AS1-213ENST00000533996 TSHBP01222 138 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 IFNA1P01562 189 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 CTRLP40313 264 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 RPL35P42766 123 aaKnown RBP5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 SMIM15Q7Z3B0 74 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 C5orf38Q86SI9 138 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 PPDPFQ9H3Y8 114 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 SMDT1Q9H4I9 107 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 ALG5Q9Y673 324 aa5.35□□□□□ -1.55
SOX9-AS1-213ENST00000533996 GAGE2EQ4V326 116 aa5.34□□□□□ -1.55
SOX9-AS1-213ENST00000533996 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
SOX9-AS1-213ENST00000533996 S100ZQ8WXG8 99 aa5.34□□□□□ -1.55
SOX9-AS1-213ENST00000533996 GAGE2DQ9UEU5 116 aa5.34□□□□□ -1.55
SOX9-AS1-213ENST00000533996 C7orf77A4D0Y5 90 aa5.33□□□□□ -1.56
SOX9-AS1-213ENST00000533996 RPL28P46779 137 aaKnown RBP5.33□□□□□ -1.56
SOX9-AS1-213ENST00000533996 MBD3L1Q8WWY6 194 aa5.33□□□□□ -1.56
SOX9-AS1-213ENST00000533996 BIN3Q9NQY0 253 aa5.33□□□□□ -1.56
SOX9-AS1-213ENST00000533996 UPK1BO75841 260 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 CFC1BP0CG36 223 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 FAM229BQ4G0N7 80 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 KCNRGQ8N5I3 272 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 LINC00337Q8N6G1 96 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 ORAOV1Q8WV07 137 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 ST20Q9HBF5 79 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TRBV30A0A0K0K1B3 111 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TRBV27A0A0K0K1C4 114 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 POLR2KP53803 58 aaKnown RBP5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 SEC61BP60468 96 aaKnown RBP5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 LBHQ53QV2 105 aaPredicted RBP5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 FP248Q71RG6 208 aaPredicted RBP5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 C11orf52Q96A22 123 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TMEM242Q9NWH2 141 aa5.31□□□□□ -1.56
SOX9-AS1-213ENST00000533996 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
SOX9-AS1-213ENST00000533996 VCYO14598 125 aa5.3□□□□□ -1.56
SOX9-AS1-213ENST00000533996 CENPWQ5EE01 88 aa5.3□□□□□ -1.56
SOX9-AS1-213ENST00000533996 UBE2D4Q9Y2X8 147 aa5.3□□□□□ -1.56
SOX9-AS1-213ENST00000533996 IGHV3OR16-9A0A0B4J2B5 98 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 BCE1O60756 84 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 IGKV2-30P06310 120 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 GNG4P50150 75 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 CCL20P78556 96 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 C9orf129Q5T035 196 aaKnown RBP5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 NDUFA13Q9P0J0 144 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 C22orf24Q9Y442 160 aa5.29□□□□□ -1.56
SOX9-AS1-213ENST00000533996 RAB19A4D1S5 217 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 UMAD1C9J7I0 102 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 FOXA3P55318 350 aaPredicted RBP5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 DEFA1P59665 94 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 IFITM3Q01628 133 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 RNASE7Q9H1E1 156 aaKnown RBP5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 MANBALQ9NQG1 85 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
SOX9-AS1-213ENST00000533996 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 FCER1GP30273 86 aa5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 Q5BKY6 102 aa5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 RNASE13Q5GAN3 156 aaKnown RBP5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 ANAPC11Q9NYG5 84 aa5.27□□□□□ -1.57
SOX9-AS1-213ENST00000533996 PRSS2P07478 247 aa5.26□□□□□ -1.57
SOX9-AS1-213ENST00000533996 GIPP09681 153 aaPredicted RBP5.26□□□□□ -1.57
SOX9-AS1-213ENST00000533996 KIAA0087Q14695 138 aa5.26□□□□□ -1.57
SOX9-AS1-213ENST00000533996 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
SOX9-AS1-213ENST00000533996 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
SOX9-AS1-213ENST00000533996 FXYD6-FXYD2A0A087WZ82 144 aa5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 A0A1B0GV50 99 aa5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 PPP1R17O96001 155 aa5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 Q6ZUT4 128 aa5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 KIR2DL4Q99706 377 aa5.25□□□□□ -1.57
SOX9-AS1-213ENST00000533996 A0A1B0GVG6 124 aa5.24□□□□□ -1.57
SOX9-AS1-213ENST00000533996 ZNF727A8MUV8 499 aa5.24□□□□□ -1.57
SOX9-AS1-213ENST00000533996 PDE6DO43924 150 aa5.24□□□□□ -1.57
SOX9-AS1-213ENST00000533996 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 TGIF2-C20orf24A0A0A6YYL0 155 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 RAB4AP20338 218 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 MT1HP80294 61 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 MRPS36P82909 103 aaKnown RBP5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 TMEM191AQ9H0A3 160 aa5.23□□□□□ -1.57
SOX9-AS1-213ENST00000533996 PPP1R2P9O14990 202 aa5.22□□□□□ -1.57
SOX9-AS1-213ENST00000533996 TCAPO15273 167 aa5.22□□□□□ -1.57
SOX9-AS1-213ENST00000533996 LINC01561Q8N1V8 128 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms