RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 NDUFB1O75438 58 aa12.75□□□□□ -0.37
PHRF1-205ENST00000533464 CDC42SE2Q9NRR3 84 aa12.75□□□□□ -0.37
PHRF1-205ENST00000533464 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
PHRF1-205ENST00000533464 PCNTO95613 3336 aa12.74□□□□□ -0.37
PHRF1-205ENST00000533464 KPRPQ5T749 579 aaPredicted RBP12.74□□□□□ -0.37
PHRF1-205ENST00000533464 ACANP16112 2415 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 EPG5Q9HCE0 2579 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 A0A096LNJ9 63 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 SYCNQ0VAF6 134 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 C14orf177Q52M58 125 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
PHRF1-205ENST00000533464 LELP1Q5T871 98 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 NDUFA7O95182 113 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 OXLD1Q5BKU9 147 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
PHRF1-205ENST00000533464 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.38
PHRF1-205ENST00000533464 IL17DQ8TAD2 202 aa12.7□□□□□ -0.38
PHRF1-205ENST00000533464 IGHV4-30-4P0DP06 118 aa12.69□□□□□ -0.38
PHRF1-205ENST00000533464 TRAV10A0A0B4J240 114 aa12.69□□□□□ -0.38
PHRF1-205ENST00000533464 IGLV4-69A0A075B6H9 119 aa12.69□□□□□ -0.38
PHRF1-205ENST00000533464 MP68P56378 58 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 SMIM20Q8N5G0 67 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 TRAV23DV6A0A075B6W5 121 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 LST1O00453 97 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
PHRF1-205ENST00000533464 BPY2O14599 106 aa12.67□□□□□ -0.38
PHRF1-205ENST00000533464 TMEM258P61165 79 aa12.66□□□□□ -0.38
PHRF1-205ENST00000533464 CHCHD7Q9BUK0 85 aa12.66□□□□□ -0.38
PHRF1-205ENST00000533464 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
PHRF1-205ENST00000533464 TET2Q6N021 2002 aaPredicted RBP12.66□□□□□ -0.38
PHRF1-205ENST00000533464 IGLV2-18A0A075B6J9 118 aa12.66□□□□□ -0.38
PHRF1-205ENST00000533464 B9D2Q9BPU9 175 aa12.66□□□□□ -0.38
PHRF1-205ENST00000533464 FAM19A5Q7Z5A7 132 aaPredicted RBP12.66□□□□□ -0.38
PHRF1-205ENST00000533464 UPK3BQ9BT76 320 aa12.66□□□□□ -0.38
PHRF1-205ENST00000533464 A0A096LNI7 61 aa12.65□□□□□ -0.38
PHRF1-205ENST00000533464 FAM19A1Q7Z5A9 133 aa12.65□□□□□ -0.38
PHRF1-205ENST00000533464 NDUFV3P56181 108 aaKnown RBP12.65□□□□□ -0.38
PHRF1-205ENST00000533464 SMIM11BQ8TCY0 68 aa12.65□□□□□ -0.38
PHRF1-205ENST00000533464 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.39
PHRF1-205ENST00000533464 LINC00694P0DN24 101 aa12.65□□□□□ -0.39
PHRF1-205ENST00000533464 RNF183Q96D59 192 aa12.64□□□□□ -0.39
PHRF1-205ENST00000533464 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
PHRF1-205ENST00000533464 SMIM1B2RUZ4 78 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 IGKV2-28A0A075B6P5 120 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 IGKV2D-28P01615 120 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 Q6ZQY7 126 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 COL4A2P08572 1712 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 Q8IZM0 81 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 A0A087WZ39 114 aa12.63□□□□□ -0.39
PHRF1-205ENST00000533464 H0Y9J4 135 aa12.62□□□□□ -0.39
PHRF1-205ENST00000533464 Q6ZSN1 163 aa12.62□□□□□ -0.39
PHRF1-205ENST00000533464 NANOS2P60321 138 aaKnown RBP12.61□□□□□ -0.39
PHRF1-205ENST00000533464 SCXQ7RTU7 201 aa12.61□□□□□ -0.39
PHRF1-205ENST00000533464 COX6A2Q02221 97 aa12.61□□□□□ -0.39
PHRF1-205ENST00000533464 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
PHRF1-205ENST00000533464 CYSRT1A8MQ03 144 aa12.6□□□□□ -0.39
PHRF1-205ENST00000533464 BEAN1Q3B7T3 259 aa12.6□□□□□ -0.39
PHRF1-205ENST00000533464 A0A0J9YWU9 116 aa12.6□□□□□ -0.39
PHRF1-205ENST00000533464 ANKRD17O75179 2603 aaKnown RBP12.6□□□□□ -0.39
PHRF1-205ENST00000533464 AMELXQ99217 191 aa12.59□□□□□ -0.39
PHRF1-205ENST00000533464 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
PHRF1-205ENST00000533464 FHL2Q14192 279 aa12.59□□□□□ -0.39
PHRF1-205ENST00000533464 ENHOQ6UWT2 76 aa12.59□□□□□ -0.39
PHRF1-205ENST00000533464 WFDC9Q8NEX5 89 aa12.58□□□□□ -0.4
PHRF1-205ENST00000533464 M0R378 163 aa12.58□□□□□ -0.4
PHRF1-205ENST00000533464 CCKP06307 115 aa12.58□□□□□ -0.4
PHRF1-205ENST00000533464 COX17Q14061 63 aa12.58□□□□□ -0.4
PHRF1-205ENST00000533464 C4orf48Q5BLP8 95 aa12.58□□□□□ -0.4
PHRF1-205ENST00000533464 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
PHRF1-205ENST00000533464 RETNQ9HD89 108 aa12.56□□□□□ -0.4
PHRF1-205ENST00000533464 C20orf197Q8N268 126 aa12.56□□□□□ -0.4
PHRF1-205ENST00000533464 CSDC2Q9Y534 153 aaKnown RBP12.56□□□□□ -0.4
PHRF1-205ENST00000533464 AGRNO00468 2067 aa12.56□□□□□ -0.4
PHRF1-205ENST00000533464 ADAMTSL4-AS1Q5T5F5 129 aa12.55□□□□□ -0.4
PHRF1-205ENST00000533464 ATP5EP2Q5VTU8 51 aa12.55□□□□□ -0.4
PHRF1-205ENST00000533464 KIF25-AS1Q9Y6Z4 181 aa12.55□□□□□ -0.4
PHRF1-205ENST00000533464 J3KT08 172 aa12.54□□□□□ -0.4
PHRF1-205ENST00000533464 C9orf116Q5BN46 136 aaPredicted RBP12.54□□□□□ -0.4
PHRF1-205ENST00000533464 ZNF73O43830 326 aaPredicted RBP12.53□□□□□ -0.4
PHRF1-205ENST00000533464 UQCRQO14949 82 aa12.52□□□□□ -0.4
PHRF1-205ENST00000533464 C3orf84H3BNL1 204 aa12.52□□□□□ -0.41
PHRF1-205ENST00000533464 XGP55808 180 aa12.52□□□□□ -0.41
PHRF1-205ENST00000533464 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
PHRF1-205ENST00000533464 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
PHRF1-205ENST00000533464 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
PHRF1-205ENST00000533464 M0R2N4 97 aa12.5□□□□□ -0.41
PHRF1-205ENST00000533464 C5orf47Q569G3 176 aa12.49□□□□□ -0.41
PHRF1-205ENST00000533464 Q6ZTC4 211 aa12.49□□□□□ -0.41
PHRF1-205ENST00000533464 PRR3P79522 188 aaKnown RBP12.48□□□□□ -0.41
PHRF1-205ENST00000533464 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
PHRF1-205ENST00000533464 Q8N2B8 174 aa12.47□□□□□ -0.41
PHRF1-205ENST00000533464 PPDPFQ9H3Y8 114 aa12.47□□□□□ -0.41
PHRF1-205ENST00000533464 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
PHRF1-205ENST00000533464 LOC107984640A0A0U1RRK4 108 aa12.47□□□□□ -0.41
PHRF1-205ENST00000533464 CHKB-CPT1BH3BT56 60 aa12.47□□□□□ -0.41
PHRF1-205ENST00000533464 RPL28P46779 137 aaKnown RBP12.46□□□□□ -0.41
PHRF1-205ENST00000533464 LINC00315P59091 139 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms