RNA–Protein interactions for RNA: ENST00000533183.1

PKHD1L1-203, Transcript of PKHD1 like 1, humanhuman

TSL 3

Gene PKHD1L1, Length 807 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-203ENST00000533183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.5□□□□□ -2.33
PKHD1L1-203ENST00000533183 CDH23Q9H251 3354 aa0.5□□□□□ -2.33
PKHD1L1-203ENST00000533183 FRYQ5TBA9 3013 aa0.49□□□□□ -2.33
PKHD1L1-203ENST00000533183 SHANK2Q9UPX8 1470 aa0.49□□□□□ -2.33
PKHD1L1-203ENST00000533183 ANK2Q01484 3957 aa0.49□□□□□ -2.33
PKHD1L1-203ENST00000533183 MAP1AP78559 2803 aaPredicted RBP0.49□□□□□ -2.33
PKHD1L1-203ENST00000533183 MYO15AQ9UKN7 3530 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 PXDNQ92626 1479 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 TCHHQ07283 1943 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 CSMD2Q7Z408 3487 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 CATR1Q13166 79 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 TTC9CQ8N5M4 171 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 R4GMQ9 66 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 SPENQ96T58 3664 aaKnown RBP0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 CLASP1Q7Z460 1538 aa0.48□□□□□ -2.33
PKHD1L1-203ENST00000533183 CUBNO60494 3623 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 PI4KAP42356 2102 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 PRDM2Q13029 1718 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 SMG1Q96Q15 3661 aaKnown RBP0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 AKAIN1P0CW23 69 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 SSBP3-AS1Q7Z2R9 100 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 UBE2DNLQ8IWF7 75 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 PPP3R2Q96LZ3 170 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 LRRC7Q96NW7 1537 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 MRC1P22897 1456 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 WDFY3Q8IZQ1 3526 aa0.47□□□□□ -2.33
PKHD1L1-203ENST00000533183 ADGRG4Q8IZF6 3080 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 ZNF815PA8K554 130 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 PIN1P1O15428 100 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 DLEU1O43261 78 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 APOC2P02655 101 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 CFAP126Q5VTH2 177 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 PP6455Q8WZ26 134 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 SCN3BQ9NY72 215 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 VPS13CQ709C8 3753 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 CACNA1CQ13936 2221 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 NBASA2RRP1 2371 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 F8P00451 2351 aa0.46□□□□□ -2.34
PKHD1L1-203ENST00000533183 NWD1Q149M9 1564 aa0.45□□□□□ -2.34
PKHD1L1-203ENST00000533183 Q5BKY6 102 aa0.45□□□□□ -2.34
PKHD1L1-203ENST00000533183 LELP1Q5T871 98 aa0.45□□□□□ -2.34
PKHD1L1-203ENST00000533183 PPIP5K1Q6PFW1 1433 aa0.45□□□□□ -2.34
PKHD1L1-203ENST00000533183 PLXNB2O15031 1838 aa0.45□□□□□ -2.34
PKHD1L1-203ENST00000533183 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
PKHD1L1-203ENST00000533183 PSME4Q14997 1843 aa0.44□□□□□ -2.34
PKHD1L1-203ENST00000533183 TRIOO75962 3097 aa0.44□□□□□ -2.34
PKHD1L1-203ENST00000533183 PRUNE2Q8WUY3 3088 aa0.44□□□□□ -2.34
PKHD1L1-203ENST00000533183 QRICH2Q9H0J4 1663 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 APC2O95996 2303 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 M0R135 149 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 SPINK1P00995 79 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 IFNGP01579 166 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 SPAG11BQ08648 103 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 SPAG11AQ6PDA7 123 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 C8orf59Q8N0T1 100 aaPredicted RBP0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 TSLPQ969D9 159 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 LENEPQ9Y5L5 61 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 MGAQ8IWI9 3026 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 CPSF1Q10570 1443 aaKnown RBP0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
PKHD1L1-203ENST00000533183 SPTBN2O15020 2390 aa0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 BIVM-ERCC5R4GMW8 1640 aa0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 SRRM2Q9UQ35 2752 aaKnown RBP0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 FAM213BQ8TBF2 198 aa0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 SPANXDQ9BXN6 97 aa0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 NPVFQ9HCQ7 196 aa0.42□□□□□ -2.34
PKHD1L1-203ENST00000533183 HSPG2P98160 4391 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 OOSP1A8MZH6 123 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 CYP4F30PQ9H0H9 118 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 TACC2O95359 2948 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 NALCNQ8IZF0 1738 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 A2ML1A8K2U0 1454 aa0.41□□□□□ -2.34
PKHD1L1-203ENST00000533183 CFAP43Q8NDM7 1665 aa0.4□□□□□ -2.34
PKHD1L1-203ENST00000533183 ATMQ13315 3056 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 ASXL3Q9C0F0 2248 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 SMIM4Q8WVI0 70 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 ZNF236Q9UL36 1845 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 RALGAPBQ86X10 1494 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 CUL7Q14999 1698 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 RIMS1Q86UR5 1692 aaKnown RBP0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 LAMA5O15230 3695 aa0.4□□□□□ -2.35
PKHD1L1-203ENST00000533183 CENPEQ02224 2701 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 LRP6O75581 1613 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 AHCTF1Q8WYP5 2266 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 ALKQ9UM73 1620 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 WNK3Q9BYP7 1800 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 A0A0D9SFI3 127 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 CTXND1A0A1B0GTU2 59 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 SPINK8P0C7L1 97 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 MRPL54Q6P161 138 aaKnown RBP0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 C5orf38Q86SI9 138 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 NDUFA4L2Q9NRX3 87 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 V9GYH0 126 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 TET3O43151 1660 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 ROBO1Q9Y6N7 1651 aa0.39□□□□□ -2.35
PKHD1L1-203ENST00000533183 SNAPC5O75971 98 aa0.38□□□□□ -2.35
PKHD1L1-203ENST00000533183 KRTAP19-6Q3LI70 58 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms