RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 DGAT2L7PQ6IED9 249 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 MRPL52Q86TS9 123 aaKnown RBP7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 FAM104AQ969W3 186 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 FAM30AQ9NZY2 134 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 IGLV4-3A0A075B6K6 122 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 SCGB1D1O95968 90 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 PYY3Q5JQD4 70 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 ZC2HC1BQ5TFG8 222 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 Q8N976 141 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 VCX2Q9H322 139 aa7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 CSDC2Q9Y534 153 aaKnown RBP7.53□□□□□ -1.2
TRAPPC4-213ENST00000533149 NPSP0C0P6 89 aa7.52□□□□□ -1.2
TRAPPC4-213ENST00000533149 MRPS36P82909 103 aaKnown RBP7.52□□□□□ -1.2
TRAPPC4-213ENST00000533149 OR5A1Q8NGJ0 315 aa7.52□□□□□ -1.2
TRAPPC4-213ENST00000533149 TMEM101Q96IK0 257 aa7.52□□□□□ -1.2
TRAPPC4-213ENST00000533149 CST9LQ9H4G1 147 aa7.52□□□□□ -1.2
TRAPPC4-213ENST00000533149 A0A087WX48 190 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 TRAV12-1A0A0B4J245 112 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 TRAV8-6A0A0B4J262 113 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 RBX1P62877 108 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 PMVKQ15126 192 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 Q6ZUT4 128 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 CDC42SE2Q9NRR3 84 aa7.52□□□□□ -1.21
TRAPPC4-213ENST00000533149 IGLV4-60A0A075B6I1 120 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 A0A1B0GUV1 79 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 C20orf202A1L168 122 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 PSCAO43653 123 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 ODF1Q14990 250 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 ZNF664Q8N3J9 261 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 AMELXQ99217 191 aa7.51□□□□□ -1.21
TRAPPC4-213ENST00000533149 PKIAP61925 76 aa7.5□□□□□ -1.21
TRAPPC4-213ENST00000533149 MPV17L2Q567V2 206 aa7.5□□□□□ -1.21
TRAPPC4-213ENST00000533149 TEX43Q6ZNM6 134 aa7.5□□□□□ -1.21
TRAPPC4-213ENST00000533149 CHTOPQ9Y3Y2 248 aaKnown RBP7.5□□□□□ -1.21
TRAPPC4-213ENST00000533149 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 Q6ZSA8 131 aa7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 WFDC10BQ8IUB3 73 aa7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 Q8N3U1 123 aa7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 Q8N814 137 aa7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 MRPL35Q9NZE8 188 aaKnown RBP7.49□□□□□ -1.21
TRAPPC4-213ENST00000533149 DPM2O94777 84 aa7.48□□□□□ -1.21
TRAPPC4-213ENST00000533149 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
TRAPPC4-213ENST00000533149 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
TRAPPC4-213ENST00000533149 C10orf126Q8N4M7 172 aa7.48□□□□□ -1.21
TRAPPC4-213ENST00000533149 C2orf88Q9BSF0 95 aa7.48□□□□□ -1.21
TRAPPC4-213ENST00000533149 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 F8VRH5 84 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 IGHV3-30P01768 117 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 IGHV3-30-3P0DP02 117 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 IGHV3-30-5P0DP03 117 aa7.47□□□□□ -1.21
TRAPPC4-213ENST00000533149 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 TRAV13-1A0A0B4J241 112 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 IGKCP01834 107 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 ANGP03950 147 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 UBE2D1P51668 147 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 KRTAP10-4P60372 401 aaPredicted RBP7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC00518Q8N0U6 118 aa7.46□□□□□ -1.22
TRAPPC4-213ENST00000533149 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 IGLC3P0DOY3 106 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 PLNP26678 52 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC00269Q8N2A0 174 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 C12orf57Q99622 126 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 KLK12Q9UKR0 248 aa7.45□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC00959A0A1B0GUT2 108 aa7.44□□□□□ -1.22
TRAPPC4-213ENST00000533149 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
TRAPPC4-213ENST00000533149 C11orf86A6NJI1 115 aa7.44□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
TRAPPC4-213ENST00000533149 RNF213Q63HN8 5207 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 TINCRA0A1B0GVN0 87 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 COX6A2Q02221 97 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 REG3AQ06141 175 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 MAJINQ3KP22 176 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 CLPSL2Q6UWE3 100 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 SCXQ7RTU7 201 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 STPG4Q8N801 248 aa7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 GEMIN7Q9H840 131 aaKnown RBP7.43□□□□□ -1.22
TRAPPC4-213ENST00000533149 SEC11AP67812 179 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 S100A12P80511 92 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 SS18Q15532 418 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 ENHOQ6UWT2 76 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 FAM19A3Q7Z5A8 133 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 VAMP8Q9BV40 100 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 PRR34Q9NV39 138 aa7.42□□□□□ -1.22
TRAPPC4-213ENST00000533149 HSBP1L1C9JCN9 74 aa7.41□□□□□ -1.22
TRAPPC4-213ENST00000533149 CCL25O15444 150 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms