RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
SMPD1-208ENST00000533123 DNAH7Q8WXX0 4024 aa12.8□□□□□ -0.36
SMPD1-208ENST00000533123 TIMM21Q9BVV7 248 aa12.8□□□□□ -0.36
SMPD1-208ENST00000533123 ICOSQ9Y6W8 199 aa12.8□□□□□ -0.36
SMPD1-208ENST00000533123 MRPL23Q16540 153 aaKnown RBP12.79□□□□□ -0.36
SMPD1-208ENST00000533123 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
SMPD1-208ENST00000533123 TRBV6-8A0A0A6YYG3 113 aa12.78□□□□□ -0.36
SMPD1-208ENST00000533123 H3BNG1 76 aa12.78□□□□□ -0.36
SMPD1-208ENST00000533123 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
SMPD1-208ENST00000533123 F8W1H4 67 aa12.78□□□□□ -0.36
SMPD1-208ENST00000533123 UBE2L6O14933 153 aa12.78□□□□□ -0.36
SMPD1-208ENST00000533123 ZNF22P17026 224 aaPredicted RBP12.77□□□□□ -0.36
SMPD1-208ENST00000533123 WFDC2Q14508 124 aa12.77□□□□□ -0.36
SMPD1-208ENST00000533123 SPANXB1Q9NS25 103 aaPredicted RBP12.77□□□□□ -0.36
SMPD1-208ENST00000533123 GAGE6Q13070 117 aa12.77□□□□□ -0.37
SMPD1-208ENST00000533123 HIST1H4GQ99525 98 aa12.76□□□□□ -0.37
SMPD1-208ENST00000533123 CSDC2Q9Y534 153 aaKnown RBP12.76□□□□□ -0.37
SMPD1-208ENST00000533123 H3BMG7 143 aa12.75□□□□□ -0.37
SMPD1-208ENST00000533123 CHCHD5Q9BSY4 110 aa12.75□□□□□ -0.37
SMPD1-208ENST00000533123 UBE2D1P51668 147 aa12.74□□□□□ -0.37
SMPD1-208ENST00000533123 HERVK_113P61574 105 aa12.74□□□□□ -0.37
SMPD1-208ENST00000533123 IGHV3-64A0A075B6Q5 118 aa12.74□□□□□ -0.37
SMPD1-208ENST00000533123 TSPEAR-AS2P59090 65 aa12.74□□□□□ -0.37
SMPD1-208ENST00000533123 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
SMPD1-208ENST00000533123 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
SMPD1-208ENST00000533123 TENM2Q9NT68 2774 aa12.73□□□□□ -0.37
SMPD1-208ENST00000533123 A0A1B0GWB2 263 aa12.73□□□□□ -0.37
SMPD1-208ENST00000533123 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 SIGMAR1Q99720 223 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 MYMXA0A1B0GTQ4 84 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 H7C423 109 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 TMEM101Q96IK0 257 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
SMPD1-208ENST00000533123 DYNC2H1Q8NCM8 4307 aaKnown RBP12.72□□□□□ -0.37
SMPD1-208ENST00000533123 IGLV4-60A0A075B6I1 120 aa12.71□□□□□ -0.37
SMPD1-208ENST00000533123 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.37
SMPD1-208ENST00000533123 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
SMPD1-208ENST00000533123 ETDBQ3ZM63 59 aa12.71□□□□□ -0.37
SMPD1-208ENST00000533123 C15orf53Q8NAA6 179 aa12.71□□□□□ -0.37
SMPD1-208ENST00000533123 SCGB1A1P11684 91 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 LYPD5Q6UWN5 251 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 STARD9Q9P2P6 4700 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 COX6A2Q02221 97 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 SMAGPQ0VAQ4 97 aa12.7□□□□□ -0.38
SMPD1-208ENST00000533123 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
SMPD1-208ENST00000533123 J3QR89 54 aa12.69□□□□□ -0.38
SMPD1-208ENST00000533123 LINC00242Q5T6M2 205 aa12.69□□□□□ -0.38
SMPD1-208ENST00000533123 ZFAND6Q6FIF0 208 aa12.69□□□□□ -0.38
SMPD1-208ENST00000533123 GEMIN7Q9H840 131 aaKnown RBP12.69□□□□□ -0.38
SMPD1-208ENST00000533123 TRAV8-3A0A0A6YYJ7 113 aa12.69□□□□□ -0.38
SMPD1-208ENST00000533123 ESRGQ1W209 222 aa12.68□□□□□ -0.38
SMPD1-208ENST00000533123 MTURNQ8N3F0 131 aa12.68□□□□□ -0.38
SMPD1-208ENST00000533123 CDKN2A-AS1Q9UH64 79 aa12.68□□□□□ -0.38
SMPD1-208ENST00000533123 PLECQ15149 4684 aaKnown RBP12.68□□□□□ -0.38
SMPD1-208ENST00000533123 J3QQQ9 107 aa12.68□□□□□ -0.38
SMPD1-208ENST00000533123 PLEKHB2Q96CS7 222 aa12.68□□□□□ -0.38
SMPD1-208ENST00000533123 SPINK8P0C7L1 97 aa12.67□□□□□ -0.38
SMPD1-208ENST00000533123 WWC2-AS2Q96NR7 200 aa12.67□□□□□ -0.38
SMPD1-208ENST00000533123 LYSTQ99698 3801 aa12.67□□□□□ -0.38
SMPD1-208ENST00000533123 IGKV3OR2-268A0A0C4DH90 116 aa12.66□□□□□ -0.38
SMPD1-208ENST00000533123 LEPROTO15243 131 aa12.66□□□□□ -0.38
SMPD1-208ENST00000533123 MUC7Q8TAX7 377 aa12.66□□□□□ -0.38
SMPD1-208ENST00000533123 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
SMPD1-208ENST00000533123 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
SMPD1-208ENST00000533123 TIRAPP58753 221 aa12.66□□□□□ -0.38
SMPD1-208ENST00000533123 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.38
SMPD1-208ENST00000533123 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
SMPD1-208ENST00000533123 LELP1Q5T871 98 aa12.65□□□□□ -0.38
SMPD1-208ENST00000533123 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
SMPD1-208ENST00000533123 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
SMPD1-208ENST00000533123 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
SMPD1-208ENST00000533123 HERVK_113P63121 156 aa12.64□□□□□ -0.39
SMPD1-208ENST00000533123 SCGB1D4Q6XE38 83 aa12.64□□□□□ -0.39
SMPD1-208ENST00000533123 Q8N3U1 123 aa12.64□□□□□ -0.39
SMPD1-208ENST00000533123 PGPEP1Q9NXJ5 209 aa12.64□□□□□ -0.39
SMPD1-208ENST00000533123 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
SMPD1-208ENST00000533123 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
SMPD1-208ENST00000533123 CCL18P55774 89 aa12.61□□□□□ -0.39
SMPD1-208ENST00000533123 CLPSL2Q6UWE3 100 aa12.6□□□□□ -0.39
SMPD1-208ENST00000533123 WFDC10BQ8IUB3 73 aa12.6□□□□□ -0.39
SMPD1-208ENST00000533123 A0A1B0GUV1 79 aa12.6□□□□□ -0.39
SMPD1-208ENST00000533123 TMEM238LA0A1B0GVL6 79 aa12.6□□□□□ -0.39
SMPD1-208ENST00000533123 A6NJY4 79 aa12.6□□□□□ -0.39
SMPD1-208ENST00000533123 SMCPP49901 116 aaPredicted RBP12.6□□□□□ -0.39
SMPD1-208ENST00000533123 APOMO95445 188 aa12.59□□□□□ -0.39
SMPD1-208ENST00000533123 TSPAN13O95857 204 aa12.58□□□□□ -0.4
SMPD1-208ENST00000533123 FOXI1Q12951 378 aa12.58□□□□□ -0.4
SMPD1-208ENST00000533123 C10orf126Q8N4M7 172 aa12.58□□□□□ -0.4
SMPD1-208ENST00000533123 SMIM1B2RUZ4 78 aa12.57□□□□□ -0.4
SMPD1-208ENST00000533123 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMPD1-208ENST00000533123 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
SMPD1-208ENST00000533123 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
SMPD1-208ENST00000533123 IGLV5-39A0A0G2JS06 123 aa12.55□□□□□ -0.4
SMPD1-208ENST00000533123 A0A1B0GV72 72 aa12.55□□□□□ -0.4
SMPD1-208ENST00000533123 LINC00269Q8N2A0 174 aa12.55□□□□□ -0.4
SMPD1-208ENST00000533123 CASC10Q5T4H9 136 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
SMPD1-208ENST00000533123 LOC107984156A0A0G2JMH3 177 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms