RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 TTC32Q5I0X7 151 aa12.83□□□□□ -0.36
UBXN1-213ENST00000532904 CSDC2Q9Y534 153 aaKnown RBP12.83□□□□□ -0.36
UBXN1-213ENST00000532904 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
UBXN1-213ENST00000532904 LINC00694P0DN24 101 aa12.82□□□□□ -0.36
UBXN1-213ENST00000532904 COPS9Q8WXC6 57 aa12.82□□□□□ -0.36
UBXN1-213ENST00000532904 FAM110AQ9BQ89 295 aa12.82□□□□□ -0.36
UBXN1-213ENST00000532904 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
UBXN1-213ENST00000532904 IGLV1-51P01701 117 aa12.81□□□□□ -0.36
UBXN1-213ENST00000532904 C1orf158Q8N1D5 194 aa12.81□□□□□ -0.36
UBXN1-213ENST00000532904 COX7A2LO14548 114 aa12.8□□□□□ -0.36
UBXN1-213ENST00000532904 SOSTDC1Q6X4U4 206 aa12.8□□□□□ -0.36
UBXN1-213ENST00000532904 TRBV10-1A0A0K0K1A3 114 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 RPL36AP83881 106 aaKnown RBP12.79□□□□□ -0.36
UBXN1-213ENST00000532904 SHISA2Q6UWI4 295 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 NTM-AS1Q6ZSK4 140 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 STHQ8IWL8 128 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 RPL36ALQ969Q0 106 aaKnown RBP12.79□□□□□ -0.36
UBXN1-213ENST00000532904 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
UBXN1-213ENST00000532904 CUBNO60494 3623 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 TRGV1A0A0A0MS02 117 aa12.79□□□□□ -0.36
UBXN1-213ENST00000532904 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
UBXN1-213ENST00000532904 K7EQD1 137 aa12.78□□□□□ -0.36
UBXN1-213ENST00000532904 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
UBXN1-213ENST00000532904 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
UBXN1-213ENST00000532904 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
UBXN1-213ENST00000532904 NOTCH2Q04721 2471 aa12.78□□□□□ -0.36
UBXN1-213ENST00000532904 F5H768 121 aa12.77□□□□□ -0.36
UBXN1-213ENST00000532904 TRAV13-1A0A0B4J241 112 aa12.77□□□□□ -0.37
UBXN1-213ENST00000532904 A0A0U1RRA0 63 aa12.77□□□□□ -0.37
UBXN1-213ENST00000532904 PPDPFQ9H3Y8 114 aa12.77□□□□□ -0.37
UBXN1-213ENST00000532904 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
UBXN1-213ENST00000532904 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.37
UBXN1-213ENST00000532904 HERV-K104P63124 156 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 OTOGQ6ZRI0 2925 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE7O76087 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 GAGE4Q13068 117 aa12.76□□□□□ -0.37
UBXN1-213ENST00000532904 B5MCH6 92 aa12.75□□□□□ -0.37
UBXN1-213ENST00000532904 MEIG1Q5JSS6 88 aa12.75□□□□□ -0.37
UBXN1-213ENST00000532904 SETXQ7Z333 2677 aaKnown RBP12.75□□□□□ -0.37
UBXN1-213ENST00000532904 Q6ZTI0 123 aa12.74□□□□□ -0.37
UBXN1-213ENST00000532904 SS18L2Q9UHA2 77 aa12.74□□□□□ -0.37
UBXN1-213ENST00000532904 TRBV7-7A0A0K0K1E9 115 aa12.73□□□□□ -0.37
UBXN1-213ENST00000532904 CCDC179H3BU77 68 aa12.73□□□□□ -0.37
UBXN1-213ENST00000532904 TRACP01848 142 aa12.73□□□□□ -0.37
UBXN1-213ENST00000532904 ACYP1P07311 99 aa12.73□□□□□ -0.37
UBXN1-213ENST00000532904 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
UBXN1-213ENST00000532904 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
UBXN1-213ENST00000532904 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
UBXN1-213ENST00000532904 PF4P02776 101 aa12.7□□□□□ -0.38
UBXN1-213ENST00000532904 TMEM243Q9BU79 118 aa12.69□□□□□ -0.38
UBXN1-213ENST00000532904 UBE2L6O14933 153 aa12.68□□□□□ -0.38
UBXN1-213ENST00000532904 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
UBXN1-213ENST00000532904 BAALC-AS2P0C853 105 aa12.67□□□□□ -0.38
UBXN1-213ENST00000532904 SVIPQ8NHG7 77 aa12.67□□□□□ -0.38
UBXN1-213ENST00000532904 NOP10Q9NPE3 64 aaKnown RBP12.67□□□□□ -0.38
UBXN1-213ENST00000532904 GIG44P09565 113 aaPredicted RBP12.66□□□□□ -0.38
UBXN1-213ENST00000532904 FAM222AQ5U5X8 452 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 FAM218AQ96MZ4 157 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 C2CD3Q4AC94 2353 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 TRAV13-2A0A0B4J235 113 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 IMUPQ9GZP8 106 aa12.66□□□□□ -0.38
UBXN1-213ENST00000532904 RPL28P46779 137 aaKnown RBP12.65□□□□□ -0.38
UBXN1-213ENST00000532904 COX7B2Q8TF08 81 aa12.65□□□□□ -0.39
UBXN1-213ENST00000532904 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
UBXN1-213ENST00000532904 PLAC8L1A1L4L8 177 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 SDIM1Q6ZPB5 146 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 SMCR5Q8TEV8 140 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 CRPP02741 224 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 LINC00643Q86TS7 51 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 C16orf74Q96GX8 76 aa12.63□□□□□ -0.39
UBXN1-213ENST00000532904 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
UBXN1-213ENST00000532904 MIR7-3HGQ8N6C7 128 aa12.62□□□□□ -0.39
UBXN1-213ENST00000532904 CHCHD5Q9BSY4 110 aa12.62□□□□□ -0.39
UBXN1-213ENST00000532904 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
UBXN1-213ENST00000532904 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
UBXN1-213ENST00000532904 CSNK1G2-AS1Q8NCQ2 148 aa12.61□□□□□ -0.39
UBXN1-213ENST00000532904 IGKV2-28A0A075B6P5 120 aa12.61□□□□□ -0.39
UBXN1-213ENST00000532904 IGKV2D-28P01615 120 aa12.61□□□□□ -0.39
UBXN1-213ENST00000532904 LINC00337Q8N6G1 96 aa12.61□□□□□ -0.39
UBXN1-213ENST00000532904 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
UBXN1-213ENST00000532904 C9orf66Q5T8R8 295 aa12.6□□□□□ -0.39
UBXN1-213ENST00000532904 INAFM2P0DMQ5 153 aa12.6□□□□□ -0.39
UBXN1-213ENST00000532904 RPL35AP18077 110 aaKnown RBP12.6□□□□□ -0.39
UBXN1-213ENST00000532904 SND1-IT1Q9HBX3 110 aa12.6□□□□□ -0.39
UBXN1-213ENST00000532904 OVOL2Q9BRP0 275 aa12.59□□□□□ -0.39
UBXN1-213ENST00000532904 JMJD1CQ15652 2540 aa12.58□□□□□ -0.39
UBXN1-213ENST00000532904 MALP21145 153 aa12.58□□□□□ -0.39
UBXN1-213ENST00000532904 TOMM7Q9P0U1 55 aa12.58□□□□□ -0.4
UBXN1-213ENST00000532904 FAM236AA0A1B0GUQ0 79 aa12.57□□□□□ -0.4
UBXN1-213ENST00000532904 FAM236BA0A1B0GV22 79 aa12.57□□□□□ -0.4
UBXN1-213ENST00000532904 Q9HAA7 133 aa12.57□□□□□ -0.4
UBXN1-213ENST00000532904 IGLV4-60A0A075B6I1 120 aa12.57□□□□□ -0.4
UBXN1-213ENST00000532904 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms