RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
CAPRIN1-212ENST00000532820 H7C2G1 150 aa9.39□□□□□ -0.91
CAPRIN1-212ENST00000532820 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
CAPRIN1-212ENST00000532820 TMEM262E9PQX1 116 aa9.39□□□□□ -0.91
CAPRIN1-212ENST00000532820 A4D1N5 150 aa9.38□□□□□ -0.91
CAPRIN1-212ENST00000532820 C3orf56Q8N813 242 aa9.38□□□□□ -0.91
CAPRIN1-212ENST00000532820 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
CAPRIN1-212ENST00000532820 CFC1P0CG37 223 aa9.38□□□□□ -0.91
CAPRIN1-212ENST00000532820 CLPSL2Q6UWE3 100 aa9.38□□□□□ -0.91
CAPRIN1-212ENST00000532820 LOC107984156A0A0G2JMH3 177 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 H3BMG7 143 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 ARL17AQ8IVW1 177 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 ATP6V0E2Q8NHE4 81 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 SMIM9A6NGZ8 99 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 PAX4O43316 350 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 KRTAP10-11P60412 298 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 RETNQ9HD89 108 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 DAD1P61803 113 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 HERVK_113P63121 156 aa9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 SPANXB1Q9NS25 103 aaPredicted RBP9.37□□□□□ -0.91
CAPRIN1-212ENST00000532820 A0A1B0GWB2 263 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 TIRAPP58753 221 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 G3V4G9 280 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
CAPRIN1-212ENST00000532820 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 TSPAN13O95857 204 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 Q9H8V8 135 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 F5H768 121 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 Q8N3U1 123 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 Q8NAQ8 132 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 LITAFQ99732 161 aa9.35□□□□□ -0.91
CAPRIN1-212ENST00000532820 IGLV5-45A0A087WSX0 123 aa9.34□□□□□ -0.91
CAPRIN1-212ENST00000532820 ZFAND6Q6FIF0 208 aa9.34□□□□□ -0.91
CAPRIN1-212ENST00000532820 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
CAPRIN1-212ENST00000532820 NBEAL1Q6ZS30 2694 aa9.33□□□□□ -0.92
CAPRIN1-212ENST00000532820 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
CAPRIN1-212ENST00000532820 CKS1BP61024 79 aa9.33□□□□□ -0.92
CAPRIN1-212ENST00000532820 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
CAPRIN1-212ENST00000532820 PRIMA1Q86XR5 153 aa9.33□□□□□ -0.92
CAPRIN1-212ENST00000532820 A0A1B0GV72 72 aa9.32□□□□□ -0.92
CAPRIN1-212ENST00000532820 HERV-K104P63124 156 aa9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 RPL24P83731 157 aaKnown RBP9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 RNF183Q96D59 192 aa9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 PRB2P02812 416 aaPredicted RBP9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 PSMB2P49721 201 aa9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 PRO1854Q9UHT4 67 aa9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 CMYA5Q8N3K9 4069 aa9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
CAPRIN1-212ENST00000532820 IGLV5-39A0A0G2JS06 123 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 MIFP14174 115 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 XCL1P47992 114 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 WFDC2Q14508 124 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 Q1RN00 199 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 NDUFA1O15239 70 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 ATP5G1P05496 136 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 SPART-AS1P0CW21 52 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 SCGB1C2P0DMR2 95 aa9.3□□□□□ -0.92
CAPRIN1-212ENST00000532820 MEIG1Q5JSS6 88 aa9.29□□□□□ -0.92
CAPRIN1-212ENST00000532820 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
CAPRIN1-212ENST00000532820 H7C423 109 aa9.28□□□□□ -0.92
CAPRIN1-212ENST00000532820 WIPF1O43516 503 aa9.28□□□□□ -0.92
CAPRIN1-212ENST00000532820 MIAQ16674 131 aa9.28□□□□□ -0.92
CAPRIN1-212ENST00000532820 MGAM2Q2M2H8 2515 aa9.28□□□□□ -0.92
CAPRIN1-212ENST00000532820 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
CAPRIN1-212ENST00000532820 SH2D6Q7Z4S9 175 aa9.27□□□□□ -0.93
CAPRIN1-212ENST00000532820 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
CAPRIN1-212ENST00000532820 LINC00269Q8N2A0 174 aa9.27□□□□□ -0.93
CAPRIN1-212ENST00000532820 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
CAPRIN1-212ENST00000532820 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
CAPRIN1-212ENST00000532820 IGHV3OR16-9A0A0B4J2B5 98 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 TCL1BO95988 128 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 CIRBPQ14011 172 aaKnown RBP9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 SPANXDQ9BXN6 97 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 SPANXCQ9NY87 97 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 TEX48A0A1B0GUV7 120 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 ANGP03950 147 aaKnown RBP9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 ETDBQ3ZM63 59 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
CAPRIN1-212ENST00000532820 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
CAPRIN1-212ENST00000532820 SOSTDC1Q6X4U4 206 aa9.24□□□□□ -0.93
CAPRIN1-212ENST00000532820 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
CAPRIN1-212ENST00000532820 A0A0B4J2C4 111 aa9.23□□□□□ -0.93
CAPRIN1-212ENST00000532820 PFN2P35080 140 aa9.22□□□□□ -0.93
CAPRIN1-212ENST00000532820 SS18Q15532 418 aa9.22□□□□□ -0.93
CAPRIN1-212ENST00000532820 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.93
CAPRIN1-212ENST00000532820 Q6ZTC4 211 aa9.21□□□□□ -0.93
CAPRIN1-212ENST00000532820 A0A1B0GUV1 79 aa9.21□□□□□ -0.94
CAPRIN1-212ENST00000532820 PRO0461Q9UI25 63 aa9.21□□□□□ -0.94
CAPRIN1-212ENST00000532820 A0A087WZ39 114 aa9.21□□□□□ -0.94
CAPRIN1-212ENST00000532820 F8W1H4 67 aa9.21□□□□□ -0.94
CAPRIN1-212ENST00000532820 C2orf82Q6UX34 121 aa9.21□□□□□ -0.94
CAPRIN1-212ENST00000532820 TRIAP1O43715 76 aa9.2□□□□□ -0.94
CAPRIN1-212ENST00000532820 TIMM17BO60830 172 aa9.2□□□□□ -0.94
CAPRIN1-212ENST00000532820 RPL13AP40429 203 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms