RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 IGLV4-69A0A075B6H9 119 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 UBE2D4Q9Y2X8 147 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 A0A096LNI7 61 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 POLR2KP53803 58 aaKnown RBP8.19□□□□□ -1.1
PTPRK-221ENST00000532331 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
PTPRK-221ENST00000532331 HCFC1P51610 2035 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 LINC00959A0A1B0GUT2 108 aa8.18□□□□□ -1.1
PTPRK-221ENST00000532331 TIMM17BO60830 172 aa8.18□□□□□ -1.1
PTPRK-221ENST00000532331 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
PTPRK-221ENST00000532331 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
PTPRK-221ENST00000532331 PTPRBP23467 1997 aa8.18□□□□□ -1.1
PTPRK-221ENST00000532331 FHL3Q13643 280 aa8.17□□□□□ -1.1
PTPRK-221ENST00000532331 IGLV5-52A0A0A0MRZ9 124 aa8.17□□□□□ -1.1
PTPRK-221ENST00000532331 RNASE8Q8TDE3 154 aaKnown RBP8.17□□□□□ -1.1
PTPRK-221ENST00000532331 TRAV23DV6A0A075B6W5 121 aa8.17□□□□□ -1.1
PTPRK-221ENST00000532331 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 SLPIP03973 132 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 TLN2Q9Y4G6 2542 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 UBE2D3P61077 147 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 UBE2D2P62837 147 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 TRIAP1O43715 76 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
PTPRK-221ENST00000532331 USP9XQ93008 2570 aaPredicted RBP8.15□□□□□ -1.1
PTPRK-221ENST00000532331 A8MZ25 164 aa8.15□□□□□ -1.1
PTPRK-221ENST00000532331 CNFNQ9BYD5 112 aa8.15□□□□□ -1.1
PTPRK-221ENST00000532331 M0R378 163 aa8.15□□□□□ -1.1
PTPRK-221ENST00000532331 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
PTPRK-221ENST00000532331 MRPS12O15235 138 aaKnown RBP8.15□□□□□ -1.11
PTPRK-221ENST00000532331 ATG2AQ2TAZ0 1938 aa8.15□□□□□ -1.11
PTPRK-221ENST00000532331 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
PTPRK-221ENST00000532331 LINC00526Q96FQ7 95 aa8.14□□□□□ -1.11
PTPRK-221ENST00000532331 ZNF706Q9Y5V0 76 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-221ENST00000532331 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
PTPRK-221ENST00000532331 TEX49A0A1B0GTD5 131 aa8.14□□□□□ -1.11
PTPRK-221ENST00000532331 SS18L2Q9UHA2 77 aa8.14□□□□□ -1.11
PTPRK-221ENST00000532331 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
PTPRK-221ENST00000532331 IGKV2-28A0A075B6P5 120 aa8.13□□□□□ -1.11
PTPRK-221ENST00000532331 IGKV2D-28P01615 120 aa8.13□□□□□ -1.11
PTPRK-221ENST00000532331 TP73-AS1Q9UF72 201 aa8.13□□□□□ -1.11
PTPRK-221ENST00000532331 CDC42SE2Q9NRR3 84 aa8.13□□□□□ -1.11
PTPRK-221ENST00000532331 FSHBP01225 129 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 COX17Q14061 63 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 DHRS4-AS1Q9P1J3 65 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 EPG5Q9HCE0 2579 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 GAS8-AS1O95177 125 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 ATP5EP2Q5VTU8 51 aa8.12□□□□□ -1.11
PTPRK-221ENST00000532331 Q8IZM0 81 aa8.11□□□□□ -1.11
PTPRK-221ENST00000532331 MUC7Q8TAX7 377 aa8.11□□□□□ -1.11
PTPRK-221ENST00000532331 FN1P02751 2386 aaKnown RBP8.11□□□□□ -1.11
PTPRK-221ENST00000532331 FHL2Q14192 279 aa8.1□□□□□ -1.11
PTPRK-221ENST00000532331 EXPH5Q8NEV8 1989 aa8.1□□□□□ -1.11
PTPRK-221ENST00000532331 CCKP06307 115 aa8.1□□□□□ -1.11
PTPRK-221ENST00000532331 BEAN1Q3B7T3 259 aa8.1□□□□□ -1.11
PTPRK-221ENST00000532331 CENPFP49454 3210 aa8.1□□□□□ -1.11
PTPRK-221ENST00000532331 SEC61GP60059 68 aa8.09□□□□□ -1.11
PTPRK-221ENST00000532331 SDIM1Q6ZPB5 146 aa8.09□□□□□ -1.11
PTPRK-221ENST00000532331 Q6ZQY7 126 aa8.09□□□□□ -1.11
PTPRK-221ENST00000532331 SCXQ7RTU7 201 aa8.09□□□□□ -1.11
PTPRK-221ENST00000532331 IGIPA6NJ69 53 aa8.08□□□□□ -1.12
PTPRK-221ENST00000532331 USP9YO00507 2555 aaPredicted RBP8.08□□□□□ -1.12
PTPRK-221ENST00000532331 PLAC8L1A1L4L8 177 aa8.08□□□□□ -1.12
PTPRK-221ENST00000532331 J3KT08 172 aa8.08□□□□□ -1.12
PTPRK-221ENST00000532331 PPDPFQ9H3Y8 114 aa8.08□□□□□ -1.12
PTPRK-221ENST00000532331 CYSRT1A8MQ03 144 aa8.08□□□□□ -1.12
PTPRK-221ENST00000532331 MDFIQ99750 246 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 DOPEY1Q5JWR5 2465 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 ENHOQ6UWT2 76 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 SMIM11BQ8TCY0 68 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 RPL37AP8A6NKH3 93 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 C2orf91Q6ZV80 131 aa8.07□□□□□ -1.12
PTPRK-221ENST00000532331 ZNF73O43830 326 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-221ENST00000532331 LINC00242Q5T6M2 205 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 CASC2Q6XLA1 102 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 TET2Q6N021 2002 aaPredicted RBP8.06□□□□□ -1.12
PTPRK-221ENST00000532331 C2CD3Q4AC94 2353 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 USP17L23D6RBM5 183 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 LYPD5Q6UWN5 251 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 POM121L12Q8N7R1 296 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 SBSPONQ8IVN8 264 aa8.06□□□□□ -1.12
PTPRK-221ENST00000532331 LST1O00453 97 aa8.05□□□□□ -1.12
PTPRK-221ENST00000532331 C3orf84H3BNL1 204 aa8.05□□□□□ -1.12
PTPRK-221ENST00000532331 WWC2-AS2Q96NR7 200 aa8.05□□□□□ -1.12
PTPRK-221ENST00000532331 WFDC10BQ8IUB3 73 aa8.04□□□□□ -1.12
PTPRK-221ENST00000532331 MT-ATP8P03928 68 aa8.04□□□□□ -1.12
PTPRK-221ENST00000532331 EGFEM1PQ0D2K5 195 aa8.04□□□□□ -1.12
PTPRK-221ENST00000532331 COX8CQ7Z4L0 72 aa8.04□□□□□ -1.12
PTPRK-221ENST00000532331 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
PTPRK-221ENST00000532331 M0QXV9 152 aa8.03□□□□□ -1.12
PTPRK-221ENST00000532331 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.03□□□□□ -1.12
PTPRK-221ENST00000532331 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
PTPRK-221ENST00000532331 NDUFC2O95298 119 aa8.03□□□□□ -1.12
PTPRK-221ENST00000532331 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
PTPRK-221ENST00000532331 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
PTPRK-221ENST00000532331 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
PTPRK-221ENST00000532331 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
PTPRK-221ENST00000532331 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.13
PTPRK-221ENST00000532331 C6orf223Q8N319 242 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms