RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 REG3GQ6UW15 175 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 NTM-AS1Q6ZSK4 140 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 RMI2Q96E14 147 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 RPL39LQ96EH5 51 aaKnown RBP3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 KIR2DL4Q99706 377 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 TMEM191AQ9H0A3 160 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 PYGO1Q9Y3Y4 419 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
HMGB1P42-201ENST00000532126 A0A087WTM6 91 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 CRPP02741 224 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 KRTAP10-2P60368 255 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 MPV17L2Q567V2 206 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 COMMD7Q86VX2 200 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 AMN1Q8IY45 258 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 Q8N976 141 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 UBE2WQ96B02 151 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 TMEM243Q9BU79 118 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
HMGB1P42-201ENST00000532126 IGLV7-46A0A075B6I9 117 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGKV2D-24A0A075B6R9 120 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 TRBV6-5A0A0K0K1A5 114 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 I3L3M4 83 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 UBE2L6O14933 153 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 PPP1R17O96001 155 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 PPBPP02775 128 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 MT-ND4LP03901 98 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 RBX1P62877 108 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 SMAGPQ0VAQ4 97 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 Q0VG73 95 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 MRPL54Q6P161 138 aaKnown RBP3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 Q8NBF4 154 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 DEFB104AQ8WTQ1 72 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
HMGB1P42-201ENST00000532126 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 LRCOL1A6NCL2 159 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 PSPHP1O15172 72 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 NDUFS5O43920 106 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 GAS8-AS1O95177 125 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 NCR2O95944 276 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 APCSP02743 223 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 FUSP35637 526 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 RPS10P46783 165 aaKnown RBP3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 HBBP68871 147 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 C1orf195Q5TG92 126 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 ENHOQ6UWT2 76 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 LINC00269Q8N2A0 174 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 Q8N814 137 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 NTN5Q8WTR8 489 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
HMGB1P42-201ENST00000532126 A0A0J9YXV3 536 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 TRBV27A0A0K0K1C4 114 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 A0A1B0GUV1 79 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 A0A1B0GXF2 115 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 LECT2O14960 151 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 DLEU1O43261 78 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 CKS2P33552 79 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 HERVK_113P61574 105 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 REG3AQ06141 175 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 MIAQ16674 131 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 MRPL51Q4U2R6 128 aaKnown RBP3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 AMMECR1LQ6DCA0 310 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 CLPSL2Q6UWE3 100 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 ATP5L2Q7Z4Y8 100 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 TMEM70Q9BUB7 260 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 PRR34Q9NV39 138 aa3.81□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGLV8-61A0A075B6I0 122 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGLV4-60A0A075B6I1 120 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 H7C423 109 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 FGF6P10767 208 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 FCER1GP30273 86 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 RAB5BP61020 215 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 WFDC2Q14508 124 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 BATFQ16520 125 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 C20orf78Q9BR46 151 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 SEC11CQ9BY50 192 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 TMEM242Q9NWH2 141 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 PKD1P98161 4303 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 KIAA1109Q2LD37 5005 aa3.8□□□□□ -1.8
HMGB1P42-201ENST00000532126 IGLV10-54A0A075B6I4 117 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 TGIF2-C20orf24A0A0A6YYL0 155 aa3.79□□□□□ -1.8
HMGB1P42-201ENST00000532126 D6R8Y8 96 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms