RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 HIST1H2BCP62807 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST2H2BEQ16778 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.6□□□□□ -0.07
LRRK1-208ENST00000532029 C5orf38Q86SI9 138 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BHQ93079 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BNQ99877 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 HIST1H2BMQ99879 126 aa14.6□□□□□ -0.07
LRRK1-208ENST00000532029 IGHV1-58A0A0C4DH39 117 aa14.59□□□□□ -0.07
LRRK1-208ENST00000532029 PRSS1P07477 247 aa14.59□□□□□ -0.07
LRRK1-208ENST00000532029 LINC00242Q5T6M2 205 aa14.59□□□□□ -0.07
LRRK1-208ENST00000532029 C15orf56Q8N910 161 aa14.59□□□□□ -0.07
LRRK1-208ENST00000532029 SEC11AP67812 179 aa14.58□□□□□ -0.08
LRRK1-208ENST00000532029 PMVKQ15126 192 aa14.58□□□□□ -0.08
LRRK1-208ENST00000532029 FAM19A2Q8N3H0 131 aa14.58□□□□□ -0.08
LRRK1-208ENST00000532029 LINC00310P59036 64 aa14.57□□□□□ -0.08
LRRK1-208ENST00000532029 HIGD2BQ4VC39 106 aa14.57□□□□□ -0.08
LRRK1-208ENST00000532029 CST9LQ9H4G1 147 aa14.57□□□□□ -0.08
LRRK1-208ENST00000532029 IGHV3OR16-9A0A0B4J2B5 98 aa14.56□□□□□ -0.08
LRRK1-208ENST00000532029 APOMO95445 188 aa14.56□□□□□ -0.08
LRRK1-208ENST00000532029 NDUFA6P56556 154 aa14.56□□□□□ -0.08
LRRK1-208ENST00000532029 GVQW2A0A096LPI5 108 aaPredicted RBP14.55□□□□□ -0.08
LRRK1-208ENST00000532029 COX6A2Q02221 97 aa14.55□□□□□ -0.08
LRRK1-208ENST00000532029 FAM19A3Q7Z5A8 133 aa14.55□□□□□ -0.08
LRRK1-208ENST00000532029 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
LRRK1-208ENST00000532029 GCSHP23434 173 aa14.54□□□□□ -0.08
LRRK1-208ENST00000532029 HERVK_113P63121 156 aa14.54□□□□□ -0.08
LRRK1-208ENST00000532029 A0A0J9YXV3 536 aa14.53□□□□□ -0.08
LRRK1-208ENST00000532029 NUPR1O60356 82 aa14.53□□□□□ -0.08
LRRK1-208ENST00000532029 ZNF561-AS1K7EIQ3 104 aa14.52□□□□□ -0.09
LRRK1-208ENST00000532029 IFI27L1Q96BM0 104 aa14.52□□□□□ -0.09
LRRK1-208ENST00000532029 A0A087WZ39 114 aa14.51□□□□□ -0.09
LRRK1-208ENST00000532029 LEPROTL1O95214 131 aa14.51□□□□□ -0.09
LRRK1-208ENST00000532029 DYNC1H1Q14204 4646 aaKnown RBP14.5□□□□□ -0.09
LRRK1-208ENST00000532029 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.5□□□□□ -0.09
LRRK1-208ENST00000532029 TINCRA0A1B0GVN0 87 aa14.5□□□□□ -0.09
LRRK1-208ENST00000532029 IGHV3-64A0A075B6Q5 118 aa14.49□□□□□ -0.09
LRRK1-208ENST00000532029 CNBPP62633 177 aaKnown RBP14.49□□□□□ -0.09
LRRK1-208ENST00000532029 LINC01561Q8N1V8 128 aa14.49□□□□□ -0.09
LRRK1-208ENST00000532029 OR10D4PQ8NGN7 298 aa14.49□□□□□ -0.09
LRRK1-208ENST00000532029 ORAOV1Q8WV07 137 aa14.49□□□□□ -0.09
LRRK1-208ENST00000532029 SPAG11BQ08648 103 aa14.48□□□□□ -0.09
LRRK1-208ENST00000532029 LINC00469Q8N7U9 141 aa14.48□□□□□ -0.09
LRRK1-208ENST00000532029 HSPB8Q9UJY1 196 aa14.48□□□□□ -0.09
LRRK1-208ENST00000532029 HERC2O95714 4834 aa14.47□□□□□ -0.09
LRRK1-208ENST00000532029 DNAH5Q8TE73 4624 aa14.47□□□□□ -0.09
LRRK1-208ENST00000532029 FABP4P15090 132 aa14.47□□□□□ -0.09
LRRK1-208ENST00000532029 KRTAP10-1P60331 282 aa14.47□□□□□ -0.09
LRRK1-208ENST00000532029 LINC00526Q96FQ7 95 aa14.47□□□□□ -0.09
LRRK1-208ENST00000532029 IGLV4-69A0A075B6H9 119 aa14.46□□□□□ -0.09
LRRK1-208ENST00000532029 LINC01620Q4KN68 170 aa14.46□□□□□ -0.09
LRRK1-208ENST00000532029 PACRGQ96M98 296 aaPredicted RBP14.46□□□□□ -0.09
LRRK1-208ENST00000532029 CDKN2A-AS1Q9UH64 79 aa14.46□□□□□ -0.09
LRRK1-208ENST00000532029 TRAV12-1A0A0B4J245 112 aa14.45□□□□□ -0.1
LRRK1-208ENST00000532029 SLPIP03973 132 aa14.45□□□□□ -0.1
LRRK1-208ENST00000532029 IGLC3P0DOY3 106 aa14.45□□□□□ -0.1
LRRK1-208ENST00000532029 C9orf163Q8N9P6 203 aa14.45□□□□□ -0.1
LRRK1-208ENST00000532029 CHAC1Q9BUX1 264 aa14.45□□□□□ -0.1
LRRK1-208ENST00000532029 CHTOPQ9Y3Y2 248 aaKnown RBP14.45□□□□□ -0.1
LRRK1-208ENST00000532029 KIAA1109Q2LD37 5005 aa14.44□□□□□ -0.1
LRRK1-208ENST00000532029 COA6Q5JTJ3 125 aaKnown RBP14.44□□□□□ -0.1
LRRK1-208ENST00000532029 PKHD1P08F94 4074 aa14.44□□□□□ -0.1
LRRK1-208ENST00000532029 IGLV5-45A0A087WSX0 123 aa14.43□□□□□ -0.1
LRRK1-208ENST00000532029 SYCNQ0VAF6 134 aa14.43□□□□□ -0.1
LRRK1-208ENST00000532029 C2orf48Q96LS8 159 aa14.43□□□□□ -0.1
LRRK1-208ENST00000532029 CAMK2N2Q96S95 79 aa14.43□□□□□ -0.1
LRRK1-208ENST00000532029 H0Y8G0 127 aa14.42□□□□□ -0.1
LRRK1-208ENST00000532029 H3BRM9 83 aa14.42□□□□□ -0.1
LRRK1-208ENST00000532029 CARD19Q96LW7 228 aa14.42□□□□□ -0.1
LRRK1-208ENST00000532029 F8WDY8 70 aa14.4□□□□□ -0.1
LRRK1-208ENST00000532029 PRSS2P07478 247 aa14.4□□□□□ -0.1
LRRK1-208ENST00000532029 TOMM7Q9P0U1 55 aa14.4□□□□□ -0.1
LRRK1-208ENST00000532029 MAP1LC3CQ9BXW4 147 aa14.39□□□□□ -0.11
LRRK1-208ENST00000532029 LRP1BQ9NZR2 4599 aa14.38□□□□□ -0.11
LRRK1-208ENST00000532029 C11orf86A6NJI1 115 aa14.38□□□□□ -0.11
LRRK1-208ENST00000532029 F8VRH5 84 aa14.38□□□□□ -0.11
LRRK1-208ENST00000532029 ZNF22P17026 224 aaPredicted RBP14.38□□□□□ -0.11
LRRK1-208ENST00000532029 MRPL35Q9NZE8 188 aaKnown RBP14.38□□□□□ -0.11
LRRK1-208ENST00000532029 SMIM1B2RUZ4 78 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 NDUFA1O15239 70 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 SPINK8P0C7L1 97 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 KIAA0087Q14695 138 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 TMEM170BQ5T4T1 132 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 Q6ZRU5 148 aa14.37□□□□□ -0.11
LRRK1-208ENST00000532029 CDK2AP2O75956 126 aa14.36□□□□□ -0.11
LRRK1-208ENST00000532029 C6orf226Q5I0X4 101 aa14.36□□□□□ -0.11
LRRK1-208ENST00000532029 PKIGQ9Y2B9 76 aa14.36□□□□□ -0.11
LRRK1-208ENST00000532029 ODF1Q14990 250 aa14.35□□□□□ -0.11
LRRK1-208ENST00000532029 SDIM1Q6ZPB5 146 aa14.35□□□□□ -0.11
LRRK1-208ENST00000532029 Q8IZM0 81 aa14.35□□□□□ -0.11
LRRK1-208ENST00000532029 CKS1BP61024 79 aa14.34□□□□□ -0.11
LRRK1-208ENST00000532029 S100A6P06703 90 aa14.33□□□□□ -0.12
LRRK1-208ENST00000532029 COX7B2Q8TF08 81 aa14.33□□□□□ -0.12
LRRK1-208ENST00000532029 FAM30AQ9NZY2 134 aa14.33□□□□□ -0.12
LRRK1-208ENST00000532029 UNQ6190/PRO20217Q6UXQ8 127 aa14.32□□□□□ -0.12
LRRK1-208ENST00000532029 RNF151Q2KHN1 245 aa14.31□□□□□ -0.12
LRRK1-208ENST00000532029 C2orf82Q6UX34 121 aa14.31□□□□□ -0.12
LRRK1-208ENST00000532029 Q6ZSA8 131 aa14.31□□□□□ -0.12
LRRK1-208ENST00000532029 CXCL5P42830 114 aa14.3□□□□□ -0.12
LRRK1-208ENST00000532029 C10orf25Q5T742 122 aa14.3□□□□□ -0.12
LRRK1-208ENST00000532029 LOC107984640A0A0U1RRK4 108 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms