RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 TMEM141Q96I45 108 aa12.12□□□□□ -0.47
PUF60-218ENST00000531995 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
PUF60-218ENST00000531995 PRSS1P07477 247 aa12.11□□□□□ -0.47
PUF60-218ENST00000531995 CD164L2Q6UWJ8 174 aa12.11□□□□□ -0.47
PUF60-218ENST00000531995 ERASQ7Z444 233 aa12.11□□□□□ -0.47
PUF60-218ENST00000531995 LINC00310P59036 64 aa12.1□□□□□ -0.47
PUF60-218ENST00000531995 RAB5BP61020 215 aa12.1□□□□□ -0.47
PUF60-218ENST00000531995 PMCHL1Q16048 86 aa12.1□□□□□ -0.47
PUF60-218ENST00000531995 C15orf56Q8N910 161 aa12.1□□□□□ -0.47
PUF60-218ENST00000531995 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
PUF60-218ENST00000531995 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.09□□□□□ -0.47
PUF60-218ENST00000531995 IFITM10A6NMD0 228 aa12.09□□□□□ -0.47
PUF60-218ENST00000531995 UBE2D1P51668 147 aa12.08□□□□□ -0.48
PUF60-218ENST00000531995 COX6A2Q02221 97 aa12.08□□□□□ -0.48
PUF60-218ENST00000531995 PDZD11Q5EBL8 140 aa12.08□□□□□ -0.48
PUF60-218ENST00000531995 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
PUF60-218ENST00000531995 VCX2Q9H322 139 aa12.08□□□□□ -0.48
PUF60-218ENST00000531995 LINC01549A6NIU2 74 aa12.07□□□□□ -0.48
PUF60-218ENST00000531995 SLPIP03973 132 aa12.07□□□□□ -0.48
PUF60-218ENST00000531995 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
PUF60-218ENST00000531995 LINC00242Q5T6M2 205 aa12.07□□□□□ -0.48
PUF60-218ENST00000531995 TEX43Q6ZNM6 134 aa12.07□□□□□ -0.48
PUF60-218ENST00000531995 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 J3QL48 77 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 NUPR1O60356 82 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 HBDP02042 147 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 LINC00528Q8N1L1 170 aa12.06□□□□□ -0.48
PUF60-218ENST00000531995 Q6ZN92 141 aa12.05□□□□□ -0.48
PUF60-218ENST00000531995 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
PUF60-218ENST00000531995 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
PUF60-218ENST00000531995 BAGE3Q86Y29 109 aa12.05□□□□□ -0.48
PUF60-218ENST00000531995 Q6ZSA8 131 aa12.04□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BKO60814 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 SERF1AO75920 110 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BJP06899 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BOP23527 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BBP33778 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BDP58876 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BCP62807 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST2H2BEQ16778 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BHQ93079 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BNQ99877 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 HIST1H2BMQ99879 126 aa12.03□□□□□ -0.48
PUF60-218ENST00000531995 LRP1Q07954 4544 aaKnown RBP12.03□□□□□ -0.48
PUF60-218ENST00000531995 GVQW2A0A096LPI5 108 aaPredicted RBP12.02□□□□□ -0.49
PUF60-218ENST00000531995 hDV102S1A0JD36 115 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 COX7A2LO14548 114 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 HIGD2BQ4VC39 106 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 PAPPA-AS1Q5QFB9 102 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 FAM19A2Q8N3H0 131 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 CST9LQ9H4G1 147 aa12.02□□□□□ -0.49
PUF60-218ENST00000531995 IGHV1-58A0A0C4DH39 117 aa12.01□□□□□ -0.49
PUF60-218ENST00000531995 PLA2G1BP04054 148 aaKnown RBP12.01□□□□□ -0.49
PUF60-218ENST00000531995 A0A0J9YXV3 536 aa12□□□□□ -0.49
PUF60-218ENST00000531995 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12□□□□□ -0.49
PUF60-218ENST00000531995 SCXQ7RTU7 201 aa12□□□□□ -0.49
PUF60-218ENST00000531995 FAT3Q8TDW7 4589 aa12□□□□□ -0.49
PUF60-218ENST00000531995 CNBPP62633 177 aaKnown RBP11.99□□□□□ -0.49
PUF60-218ENST00000531995 PMVKQ15126 192 aa11.99□□□□□ -0.49
PUF60-218ENST00000531995 LINC00526Q96FQ7 95 aa11.99□□□□□ -0.49
PUF60-218ENST00000531995 A0A087WZ39 114 aa11.98□□□□□ -0.49
PUF60-218ENST00000531995 HSBP1O75506 76 aa11.98□□□□□ -0.49
PUF60-218ENST00000531995 HMCN2Q8NDA2 5059 aa11.98□□□□□ -0.49
PUF60-218ENST00000531995 IGHV3-64A0A075B6Q5 118 aa11.97□□□□□ -0.49
PUF60-218ENST00000531995 ATP5LO75964 103 aa11.97□□□□□ -0.49
PUF60-218ENST00000531995 MALP21145 153 aa11.97□□□□□ -0.49
PUF60-218ENST00000531995 C9orf163Q8N9P6 203 aa11.97□□□□□ -0.49
PUF60-218ENST00000531995 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.49
PUF60-218ENST00000531995 TINCRA0A1B0GVN0 87 aa11.95□□□□□ -0.5
PUF60-218ENST00000531995 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
PUF60-218ENST00000531995 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
PUF60-218ENST00000531995 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
PUF60-218ENST00000531995 HERVK_113P63121 156 aa11.94□□□□□ -0.5
PUF60-218ENST00000531995 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
PUF60-218ENST00000531995 IGLV5-45A0A087WSX0 123 aa11.93□□□□□ -0.5
PUF60-218ENST00000531995 NDUFA6P56556 154 aa11.93□□□□□ -0.5
PUF60-218ENST00000531995 SEC11AP67812 179 aa11.93□□□□□ -0.5
PUF60-218ENST00000531995 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
PUF60-218ENST00000531995 SDIM1Q6ZPB5 146 aa11.93□□□□□ -0.5
PUF60-218ENST00000531995 KRTAP29-1A8MX34 341 aaPredicted RBP11.92□□□□□ -0.5
PUF60-218ENST00000531995 APOMO95445 188 aa11.92□□□□□ -0.5
PUF60-218ENST00000531995 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
PUF60-218ENST00000531995 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
PUF60-218ENST00000531995 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
PUF60-218ENST00000531995 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
PUF60-218ENST00000531995 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
PUF60-218ENST00000531995 SPAG11BQ08648 103 aa11.91□□□□□ -0.5
PUF60-218ENST00000531995 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
PUF60-218ENST00000531995 GEMIN7Q9H840 131 aaKnown RBP11.91□□□□□ -0.5
PUF60-218ENST00000531995 LEPROTL1O95214 131 aa11.9□□□□□ -0.5
PUF60-218ENST00000531995 CIRBP-AS1Q8TBR5 109 aa11.9□□□□□ -0.5
PUF60-218ENST00000531995 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
PUF60-218ENST00000531995 TRAV12-1A0A0B4J245 112 aa11.89□□□□□ -0.51
PUF60-218ENST00000531995 FABP4P15090 132 aa11.89□□□□□ -0.51
PUF60-218ENST00000531995 KRTAP10-4P60372 401 aaPredicted RBP11.89□□□□□ -0.51
PUF60-218ENST00000531995 SYCNQ0VAF6 134 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms