RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.56□□□□□ -2.16
AC055878.1-201ENST00000531858 KIF21AQ7Z4S6 1674 aa1.56□□□□□ -2.16
AC055878.1-201ENST00000531858 F8WEM9 126 aa1.56□□□□□ -2.16
AC055878.1-201ENST00000531858 LRRC37A2A6NM11 1700 aa1.56□□□□□ -2.16
AC055878.1-201ENST00000531858 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
AC055878.1-201ENST00000531858 IFT172Q9UG01 1749 aa1.55□□□□□ -2.16
AC055878.1-201ENST00000531858 G3V318 75 aa1.55□□□□□ -2.16
AC055878.1-201ENST00000531858 SPINT3P49223 89 aa1.55□□□□□ -2.16
AC055878.1-201ENST00000531858 HIVEP2P31629 2446 aa1.55□□□□□ -2.16
AC055878.1-201ENST00000531858 LOC285556D6RIA3 1793 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 PPLO60437 1756 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 M0R3E3 92 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 WFDC2Q14508 124 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 NCOA2Q15596 1464 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 PSME4Q14997 1843 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 ARFGEF1Q9Y6D6 1849 aa1.54□□□□□ -2.16
AC055878.1-201ENST00000531858 SSC5DA1L4H1 1573 aa1.53□□□□□ -2.16
AC055878.1-201ENST00000531858 MAP2P11137 1827 aaKnown RBP1.53□□□□□ -2.16
AC055878.1-201ENST00000531858 ABCC1P33527 1531 aa1.53□□□□□ -2.16
AC055878.1-201ENST00000531858 ANKARQ7Z5J8 1434 aa1.53□□□□□ -2.16
AC055878.1-201ENST00000531858 PSENENQ9NZ42 101 aa1.53□□□□□ -2.16
AC055878.1-201ENST00000531858 SPINK9Q5DT21 86 aa1.52□□□□□ -2.17
AC055878.1-201ENST00000531858 PLAC8Q9NZF1 115 aa1.52□□□□□ -2.17
AC055878.1-201ENST00000531858 TECTAO75443 2155 aa1.52□□□□□ -2.17
AC055878.1-201ENST00000531858 DLG5Q8TDM6 1919 aa1.52□□□□□ -2.17
AC055878.1-201ENST00000531858 NEXMIFQ5QGS0 1516 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 PI4KAP42356 2102 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 ESPL1Q14674 2120 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 MYMXA0A1B0GTQ4 84 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 D6R8Y8 96 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 LEPROTL1O95214 131 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 BVES-AS1Q5T3Y7 98 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 SPATA8Q6RVD6 105 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 MUSTN1Q8IVN3 82 aa1.51□□□□□ -2.17
AC055878.1-201ENST00000531858 A0A087WVE0 104 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 IGLC2P0DOY2 106 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 IGLC3P0DOY3 106 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 Q6JHZ5 121 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 UBE2D4Q9Y2X8 147 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 FLG2Q5D862 2391 aaPredicted RBP1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 CFAP74Q9C0B2 1584 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 DIP2BQ9P265 1576 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 CCDC88BA6NC98 1476 aa1.5□□□□□ -2.17
AC055878.1-201ENST00000531858 RGPD4Q7Z3J3 1758 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 TCHHQ07283 1943 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 TRBV6-1A0A0K0K1D8 114 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 IQCF6A8MYZ5 107 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 S100A3P33764 101 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 PLGLAQ15195 96 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 C10orf113Q5VZT2 155 aa1.49□□□□□ -2.17
AC055878.1-201ENST00000531858 SCN7AQ01118 1682 aa1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 H0Y9P7 68 aa1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 SMCO4Q9NRQ5 59 aa1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 ASCC3Q8N3C0 2202 aaKnown RBP1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 C1orf167Q5SNV9 1468 aa1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 PTPN23Q9H3S7 1636 aa1.48□□□□□ -2.17
AC055878.1-201ENST00000531858 UBE2DNLQ8IWF7 75 aa1.47□□□□□ -2.17
AC055878.1-201ENST00000531858 CCDC141Q6ZP82 1450 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 CEBPZOSA8MTT3 80 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 H3BUT2 72 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 KRTAP10-4P60372 401 aaPredicted RBP1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 HAMPP81172 84 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 C18orf32Q8TCD1 76 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 C10orf95Q9H7T3 257 aa1.46□□□□□ -2.18
AC055878.1-201ENST00000531858 CNTRLQ7Z7A1 2325 aa1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 SPTBP11277 2137 aa1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 RGPD3A6NKT7 1758 aaPredicted RBP1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 DEFB121Q5J5C9 76 aa1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 SUPT6HQ7KZ85 1726 aaKnown RBP1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 RP1L1Q8IWN7 2480 aaPredicted RBP1.45□□□□□ -2.18
AC055878.1-201ENST00000531858 PDCD5O14737 125 aa1.44□□□□□ -2.18
AC055878.1-201ENST00000531858 FDCSPQ8NFU4 85 aa1.44□□□□□ -2.18
AC055878.1-201ENST00000531858 ATP7BP35670 1465 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 NUP188Q5SRE5 1749 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 DOCK11Q5JSL3 2073 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 SHPRHQ149N8 1683 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 GNGT1P63211 74 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 C6orf201Q7Z4U5 140 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 DEFB107AQ8IZN7 70 aa1.43□□□□□ -2.18
AC055878.1-201ENST00000531858 ATP5EP2Q5VTU8 51 aa1.42□□□□□ -2.18
AC055878.1-201ENST00000531858 BTAF1O14981 1849 aa1.42□□□□□ -2.18
AC055878.1-201ENST00000531858 NKTRP30414 1462 aaKnown RBP1.42□□□□□ -2.18
AC055878.1-201ENST00000531858 SAMD9Q5K651 1589 aa1.42□□□□□ -2.18
AC055878.1-201ENST00000531858 NCOA6Q14686 2063 aaPredicted RBP1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 UBR1Q8IWV7 1749 aa1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 ZNF236Q9UL36 1845 aa1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 A0A1B0GUT8 65 aa1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 CFDP00746 253 aaPredicted RBP1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 SPINK7P58062 85 aa1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 ABCA8O94911 1581 aa1.41□□□□□ -2.18
AC055878.1-201ENST00000531858 SORL1Q92673 2214 aa1.4□□□□□ -2.18
AC055878.1-201ENST00000531858 KMT2BQ9UMN6 2715 aaPredicted RBP1.4□□□□□ -2.18
AC055878.1-201ENST00000531858 PDCD11Q14690 1871 aaKnown RBP1.4□□□□□ -2.19
AC055878.1-201ENST00000531858 A0A0D9SFI3 127 aa1.4□□□□□ -2.19
AC055878.1-201ENST00000531858 SMIM31A0A1B0GVY4 71 aa1.4□□□□□ -2.19
AC055878.1-201ENST00000531858 WNK3Q9BYP7 1800 aa1.4□□□□□ -2.19
AC055878.1-201ENST00000531858 LRP6O75581 1613 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms